Expression variation in connected recombinant populations of Arabidopsis thaliana highlights distinct transcriptome architectures

Table 2 Directional allelic effect in CviCol

GO term	Genes/term	eQTLs observed	Col up-regulated alleles	Cvi up-regulated alleles	P-value (directional allelic effect)
defense response	582	58	50	8	0.00002
response to far-red light	42	8	8	0	0.02
plant-type hypersensitive response	37	11	10	1	0.03
response to fungus	35	7	7	0	0.03
response to oxidative stress	231	23	18	5	0.04
response to hypoxia	20	6	6	0	0.05

GO terms showing a significant directional allelic effect. The number of genes per term, eQTLs observed and number of up-regulating allele from each parent is shown, as well as the P value associated with the allelic bias

ISSN: 1471-2164