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Figure 9 | BMC Genomics

Figure 9

From: De novo sequencing and characterization of Picrorhiza kurrooa transcriptome at two temperatures showed major transcriptome adjustments

Figure 9

Reads per exon kilobase per million (RPKM) values based gene expression of annotated cytochrome P450s ( CYPs ) in P. kurrooa transcriptome. A total of 33 unigenes were annotated as putative CYPs in P. kurrooa transcriptome. Their expression was studied at 15°C and 25°C based on RPKM values. Numerals 1-33 represent 33 CYPs in the dataset, where 4, 6, 8, 9, 12-16, 18, 21, 23-24, 27-28, 30 were classified as putative CYPs. Details of other numerals are as follows 1, flavonoid 3'-hydroxylase; 2, CYP92A46; 3, flavonoid 3'-hydroxylase; 5, cytochrome P450 NADPH-reductase; 7, CYP72A57; 10, CYP72A11; 11, CYP721A1; 17, coniferaldehyde 5-hydroxylase; 19, ABA 8'-hydroxylase CYP707A1; 20, CYP707A1; 22, cytochrome P450 monooxygenase CYP83G2; 25, cytochrome P450 monooxygenase CYP72A59; 26, cytochrome P450 monooxygenase CYP83E8; 29, cytochrome P450 CYP85A1; 31, CYP83B1; 32, CYP71AT2v2; and 33, cytochrome P450 fatty acid omega-hydroxylase. Details on accession number and BLAST are mentioned in Additional file 14.

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