From: Gene fragmentation in bacterial draft genomes: extent, consequences and mitigation
Strain | True matching fragments linked (%) | False matching fragments linked (%)b |
---|---|---|
S. albus J1074 | 127 (22.1) | 2 (0.4) |
S. clavuligerus ATCC27064 (#1) | 58 (31.2) | 0 (0) |
S. clavuligerus ATCC27064 (#2) | 40 (9.3) | 0 (0) |
S. clavuligerus ATCC27064 (#3) | 12 (20.7) | 2 (3.5) |
S. ghanaensis ATCC14672 | 182 (28.04 | 0 (0) |
S. griseoflavus Tü4000 | 326 (27.5) | 2 (0.2) |
S. hygroscopicus ATCC53653 | 220 (20.2) | 1 (0.1) |
S. lividans TK24 | 117 (27.9) | 2 (0.5) |
S. pristinaespiralis ATCC25486 | 207 (20.7) | 0 (0) |
S. roseosporus NRRL11379 | 182 (46.2) | 7 (1.8) |
S. roseosporus NRRL15998 | 192 (41.6) | 8 (1.7) |
Streptomyces sp. XylebKG-1 | 0 (0) | 0 (0) |
Streptomyces sp. C | 146 (17.9) | 9 (1.1) |
Streptomyces sp. e14 | 158 (17.7) | 2 (0.2) |
Streptomyces sp. Mg1 | 46 (12.0) | 0 (0) |
Streptomyces sp. PP-C42 | 887 (10.6) | No scaffolds |
Streptomyces sp. SPB74 | 145 (15.8) | 12 (1.3) |
Streptomyces sp. SPB78 | 109 (12.8) | 6 (0.7) |
S. sviceus ATCC29083 | 200 (28.1) | 7 (1.0) |
S. viridochromogenes DSM40736 | 102 (31.1) | 8 (2.4) |