From: Comprehensive analysis of CCCH zinc finger family in poplar (Populus trichocarpa)
No. | Gene 1 | Gene 2 | Ks | Ka | Ka/Ks | Duplication | Motif/Gene structure Characteristics | Gene Expression |
---|---|---|---|---|---|---|---|---|
1 | PtC3H1 | PtC3H2 | 0.3237 | 0.0906 | 0.2797 | O | 1 | AA |
2 | PtC3H3 | PtC3H4 | 0.2939 | 0.0477 | 0.1624 | W | 1 | AA |
3 | PtC3H5 | PtC3H6 | 0.0416 | 0.0088 | 0.2104 | T | 1 | AA |
4 | PtC3H8 | PtC3H10 | 0.2961 | 0.1455 | 0.4913 | W | 2 | AB |
5 | PtC3H9 | PtC3H65 | 0.3851 | 0.1906 | 0.4950 | W | 2 | No |
6 | PtC3H11 | PtC3H12 | 0.2979 | 0.1402 | 0.4706 | W | 2 | AB |
7 | PtC3H13 | PtC3H14 | 0.4247 | 0.1629 | 0.3835 | W | 2 | No |
8 | PtC3H15 | PtC3H16 | 0.3063 | 0.0483 | 0.1577 | W | 2 | AC |
9 | PtC3H17 | PtC3H18 | 0.3111 | 0.0603 | 0.1939 | W | 1 | AC |
10 | PtC3H22 | PtC3H23 | 0.2919 | 0.1136 | 0.3893 | W | 1 | AB |
11 | PtC3H25 | PtC3H72 | 0.3609 | 0.0571 | 0.1582 | O | 1 | No |
12 | PtC3H26 | PtC3H29 | 0.0125 | 0.0078 | 0.6247 | O | 2 | No |
13 | PtC3H32 | PtC3H34 | 0.1084 | 0.0482 | 0.4446 | O | 1 | No |
14 | PtC3H35 | PtC3H38 | 0.2903 | 0.0678 | 0.2334 | W | 1 | AC |
15 | PtC3H36 | PtC3H39 | 0.3407 | 0.0632 | 0.1855 | W | 1 | No |
16 | PtC3H42 | PtC3H43 | 0.3935 | 0.1055 | 0.2681 | W | 3 | No |
17 | PtC3H44 | PtC3H83 | 0.2825 | 0.0712 | 0.2521 | O | 1 | AC |
18 | PtC3H46 | PtC3H47 | 1.4585 | 0.7131 | 0.4889 | O | 2 | AC |
19 | PtC3H48 | PtC3H77 | 0.0234 | 0.0048 | 0.2064 | T | 1 | No |
20 | PtC3H49 | PtC3H50 | 0.2805 | 0.0684 | 0.2440 | O | 3 | AB |
21 | PtC3H51 | PtC3H52 | 0.2720 | 0.0812 | 0.2985 | W | 1 | No |
22 | PtC3H54 | PtC3H55 | 0.2172 | 0.0637 | 0.2930 | W | 2 | No |
23 | PtC3H57 | PtC3H58 | 0.1967 | 0.1130 | 0.5745 | W | 3 | AA |
24 | PtC3H60 | PtC3H61 | 0.2951 | 0.1372 | 0.4650 | W | 2 | AB |
25 | PtC3H62 | PtC3H64 | 0.2644 | 0.1031 | 0.3900 | W | 3 | No |
26 | PtC3H66 | PtC3H68 | 0.2405 | 0.0373 | 0.1552 | W | 1 | AC |
27 | PtC3H67 | PtC3H69 | 0.3284 | 0.1028 | 0.3131 | O | 1 | No |
28 | PtC3H70 | PtC3H71 | 0.2795 | 0.0818 | 0.2925 | W | 1 | AB |
29 | PtC3H74 | PtC3H75 | 0.2405 | 0.0364 | 0.1512 | W | 1 | AB |
30 | PtC3H79 | PtC3H80 | 0.2565 | 0.1364 | 0.5318 | O | 1 | No |
31 | PtC3H81 | PtC3H82 | 0.2465 | 0.1066 | 0.4326 | W | 1 | AC |
32 | PtC3H84 | PtC3H86 | 0.4725 | 0.0678 | 0.1435 | W | 1 | AD |
33 | PtC3H85 | PtC3H87 | 2.4099 | 0.1624 | 0.0674 | O | 2 | AD |
34 | PtC3H90 | PtC3H91 | 0.2513 | 0.0496 | 0.1972 | W | 1 | AB |