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Table 3 Schistosoma japonicum genome contigs containing the similar signal sequence (n = 34)

From: Origin of a novel protein-coding gene family with similar signal sequence in Schistosoma japonicum

*Contig [GenBank Accession No.]

Transcription Strand

Size, kb

Signal Sequence coordinates

SJC_C002611 [CABF01002612]

-

69.7

4848 – 4779

SJC_C002621 [CABF01002622]

-

0.6

276 – 205

SJC_C002622 [CABF01002623]

-

1.6

999 – 928

SJC_C002627 [CABF01002628]

-

3.0

2413 – 2342

SJC_C002629 [CABF01002630]

-

14.5

3856 – 3785

SJC_C013669 [CABF01013761]

-

6.8

3284 – 3217

SJC_C019814 [CABF01020047]

+

29.2

19023 – 19094

SJC_C019817 [CABF01020050]

-

10.1

6502 – 6431

SJC_C019827 [CABF01020060]

-

43.7

42511 – 42440

SJC_C022876 [CABF01022876]

-

12.4

9335 – 9264

SJC_C022884 [CABF01022884]

+

12.9

493 – 564

SJC_C023364 [CABF01023364]

-

12.4

10498 – 10427

SJC_C025268 [CABF01025296]

-

12.1

7860 – 7789

SJC_C027826 [CABF01027854]

+

4.3

433 – 504

SJC_C027833 [CABF01027861]

-

11.9

5768 – 5697

SJC_C027838 [CABF01027866]

+

19.0

12367 – 12438

SJC_C032855 [CABF01032892]

-

22.3

383 – 322

SJC_C032859 [CABF01032896]

-

9.6

4663 – 4602

SJC_C043165 [CABF01043187]

+

4.9

2484 – 2544

SJC_C057153 [CABF01057161]

+

2.8

337 – 408

SJC_C061392 [CABF01061395]

-

7.4

4411 – 4342

SJC_C067189 [CABF01067176]

+

4.9

388 – 459

SJC_C067567 [CABF01067411]

-

3.2

925 – 854

SJC_C070280 [CABF01070230]

-

6.8

271 – 200

SJC_C072631 [CABF01072590]

+

1.9

1646 – 1717

SJC_C072632 [CABF01072591]

+

2.6

446 – 517

SJC_C073741 [CABF01073691]

-

2.4

2389 – 2319

SJC_C075160 [CABF01075030]

-

6.7

5231 – 5160

SJC_C076469 [CABF01076032]

+

3.1

1295 – 1366

SJC_C077101 [CABF01078976]

-

1.1

656 – 585

SJC_C080985 [CABF01080674]

+

2.3

1094 – 1165

SJC_C081391 [CABF01080757]

-

2.1

1918 – 1847

SJC_C081246 [CABF01080893]

-

1.3

1131 – 1060

SJC_C097686 [CABF01092393]

+

5.6

4249 – 4320

  1. (-) are contigs with ‘signal sequence’ on the negative strand (anti-sense) of the genome while
  2. (+) are contigs with ‘signal sequence’ on the positive strand (sense) in the genome
  3. *Contigs are representative of disperse duplicated gene loci. We indicated the ranges for the signal sequence motif.