Expression sequence tag library derived from peripheral blood mononuclear cells of the chlorocebus sabaeus

Tchitchek, Nicolas; Jacquelin, Béatrice; Wincker, Patrick; Dossat, Carole; Silva, Corinne Da; Weissenbach, Jean; Blancher, Antoine; Müller-Trutwin, Michaela; Benecke, Arndt

doi:10.1186/1471-2164-13-279

BMC Genomics

Table 3 List of the 50 most expressed M. mulatta ortholog transcripts in present EST library

From: Expression sequence tag library derived from peripheral blood mononuclear cells of the chlorocebus sabaeus

Transcript ID	Gene symbol	Gene description	Count
ENSMMUT00000006876	HBB_MACMU	Hemoglobin subunit beta	941
ENSMMUT00000045385	LOC712934		699
ENSMMUT00000012750	CD74		526
ENSMMUT00000015401	Q3YAP9_MACMU	eukaryotic translation elongation factor 1 alpha 1	519
ENSMMUT00000000859	HBA_MACMU	Hemoglobin subunit alpha	296
ENSMMUT00000017004	LOC712553		257
ENSMMUT00000038286		MTRNR2-like (LOC100499503)	232
ENSMMUT00000005322	B2MG_MACMU	Beta-2-microglobulin	212
ENSMMUT00000005104	LOC708526		208
ENSMMUT00000043999	RPL3	ribosomal protein L3	208
ENSMMUT00000038271	COX2_MACMU	Cytochrome c oxidase subunit 2	194
ENSMMUT00000027050	DRA_MACMU	Mamu class II histocompatibility antigen, DR alpha chain	191
ENSMMUT00000038268	Q6IYH3_MACMU	ATP synthase F0 subunit 6	185
ENSMMUT00000029930	Q3YAP9_MACMU	eukaryotic translation elongation factor 1 alpha 1	173
ENSMMUT00000045510	Q9GMG8_MACMU	acidic ribosomal phosphoprotein PO	173
ENSMMUT00000023666	LOC710590		155
ENSMMUT00000039116	LOC714576		144
ENSMMUT00000027943	B0Z9V5_MACMU	major histocompatibility complex, class I, E	143
ENSMMUT00000038267	Q6IYH2_MACMU	cytochrome c oxidase subunit III	135
ENSMMUT00000010560	B5MBT6_MACMU	ribosomal protein L13a	133
ENSMMUT00000032800	UBB	polyubiquitin-B	133
ENSMMUT00000010558	Q3YAQ2_MACMU	ribosomal protein S11	131
ENSMMUT00000011109		ribosomal protein S2 (RPS2)	131
ENSMMUT00000015005	LOC711043		129
ENSMMUT00000020179	GZMB		126
ENSMMUT00000033466	Q6IEB8_MACMU	interferon alpha-inducible protein 27	123
ENSMMUT00000038664	LOC719242		123
ENSMMUT00000008204	Q6IUG4_MACMU	glyceraldehyde-3-phosphate dehydrogenase	122
ENSMMUT00000029999	RPS20		116
ENSMMUT00000032342	TPT1		116
ENSMMUT00000012806	Q9GMG8_MACMU	acidic ribosomal phosphoprotein PO	115
ENSMMUT00000005819	SRGN		107
ENSMMUT00000040341	Q9MXS5_MACMU	MHC class I antigen	106
ENSMMUT00000014609	LOC711421		105
ENSMMUT00000004034	LOC710901		104
ENSMMUT00000009232	EEF1G	eukaryotic translation elongation factor 1 gamma	103
ENSMMUT00000027208	A2TJ58_MACMU	major histocompatibility complex, class II, DP alpha	94
ENSMMUT00000013155	Q6RHR8_MACMU	actin, cytoplasmic 1	93
ENSMMUT00000041082	E0WHM2_MACMU	MHC class I antigen	92
ENSMMUT00000043841	RPS3		89
ENSMMUT00000022628	A8QWZ5_MACMU	MHC class I antigen	86
ENSMMUT00000000617	RPL12	60S ribosomal protein L12	85
ENSMMUT00000018897	RPS6		84
ENSMMUT00000025324	ARHGDIB		79
ENSMMUT00000011502	A3F8W8_MACMU	MHC class II antigen	77
ENSMMUT00000040916	A3F8W8_MACMU	MHC class II antigen	76
ENSMMUT00000005540	LOC718964		75
ENSMMUT00000018430			75
ENSMMUT00000041189	A9XN15_MACMU	major histocompatibility complex, class I, A	73
ENSMMUT00000015586	Q6UIS1_MACMU	Actin beta subunit	72

For each of the 44,725 transcripts of the M. mulatta cDNA reference, we calculated the number of original ESTs mapped, and obtained a list of the 50 most expressed M. mulatta ortholog transcripts in our EST library. For each of the most expressed M. mulatta ortholog transcript, the Ensembl transcript ID, the gene symbol, the gene description, and the number of mapped ESTs is given.

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ISSN: 1471-2164

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