Comparative transcriptome analysis between planarian Dugesia japonica and other platyhelminth species

BMC Genomics

Table 1 Summary of the materials used in the EST analysis

Library	Prefix	Plate number	cDNA amplification	Sequence primer	DNA sequencer	Valid 5' reads	Valid 3' reads	Overlap contigs	Full insert sequences
Eye	Dj_aE	000	Plasmid	SK	ABI 3700	918*	-	-	-
Head	Dj_aH	000	Plasmid	SK, M13	ABI 3700	6,444*	3,163	689	495
Head	Dj_aH	001 - 022	Plasmid	SK	ABI 3700	5,024	-	-	21
Head	Dj_aH	101 - 140	Plasmid	SK	ABI 3700	2,364	-	-	4
Head	Dj_aH	201 - 227	TempliPhi	SK	ABI 3730xl	8,426	-	-	52
Head	Dj_aH	301 - 327	TempliPhi	SK, M13	ABI 3730xl	8,366	7,107	4,516	21
Head	Dj_aH	401 - 406	TempliPhi	T3	ABI 3730xl	2,056	-	-	-
Head	Dj_aH	501 - 530	TempliPhi	T3, M13	ABI 3730xl	9,462	8,191	5,888	-
Total						43,060	18,461	11,093	593

ISSN: 1471-2164