From: Computational identification and analysis of novel sugarcane microRNAs
ID | miRNA | miRNA* | Eletronic Northern | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Biotic stress | Drought stress | Salt stress | ||||||||||
CT | AA | T 0h | T 24h | S 0h | S 24h | 0h | 1h | 6h | 24h | |||
sof-miR-Seq07 | AAAACGTCTTATAATTTGGAG | CAAATTATAAGATGTTTTGGC | 18.06 | 23.17 | - | - | - | - | - | - | - | - |
sof-miR-Seq15 | AAAATTATCGTAAATAGAGGTGGC | TAGCCACTTTGAGTTACGATAATT | - | 8.77 | 2.78 | 6.89 | 4.02 | 7.60 | - | - | - | - |
sof-miR-Seq42 | AAAGTTGTGTATCTAGAAAAG | TGGCTTTTCTAGATACATAGC | 67.25 | 37.58 | - | - | - | - | 2.08 | - | - | - |
sof-miR-Seq143 | AATTCGTCGAACAGCTGCAGC | ACGCGAGCTGTTTGGCGAATT | 295.17 | 1436.67 | - | - | - | - | - | - | - | - |
sof-miR-Seq151 | ACAAGTTTCGTGATTTTTGGA | CGAAAATCACGAAACTTGTCG | 23.04 | 12.53 | - | - | - | - | - | - | 1.24 | 1.12 |
sof-miR-Seq155 | ACACATGTGGATTGAGATGAATAC | TTCACATCAATCCACATATGTTGG | 15.57 | 27.56 | - | - | - | - | - | - | - | - |
sof-miR-Seq171 | ACTATGTATCTAGAAAAGCTA | TTTCTAGGTACATAGCTTTTG | - | - | 2.47 | 1.80 | 1.72 | - | - | - | - | 0.80 |
sof-miR-Seq183 | ACTTACAGTTTGGAACGGAGG | TCTGTTCCAAATTGTAAGTCG | - | 5.64 | - | - | - | - | - | - | - | - |
sof-miR-Seq253 | AGTCCCGAAACCTTAGTCCCGGCT | GAACCGGGACTAAAGGTGGGACAT | 21.80 | 6.26 | - | - | - | - | - | 6.22 | - | 5.93 |
sof-miR-Seq313 | ATGCCTTATAATTTGGGATGGAGA | CTCCATCCTAAATTATAAGACATT | - | - | - | - | - | - | - | - | 0.77 | - |
sof-miR-Seq345 | ATTTGACTGACACGGATTCTAGGA | TAGAGTTGTCCTAAGTCAAACTTT | 3.74 | - | - | - | - | - | - | - | - | - |
sof-miR-Seq375 | CCGGGGCCAGATCTCAGAAGC | TTCTGACTTCTGGCCCCTGCT | - | - | - | - | - | - | - | - | - | 2.24 |
sof-miR-Seq376 | CCTGTTTGGATCAGCCAAGGC | CTAGCTGATCCAAACAGGCCC | 13.08 | 9.39 | - | - | - | - | - | - | - | - |
sof-miR-Seq393 | CTAGCATGTTCCTCCTAAGAG | TTCTTGGGAGGAGCATGCTAG | - | 5.01 | - | - | - | - | - | - | - | - |
sof-miR-Seq394 | CTCCGTCCTAATATATAAGGC | CTTATATACTAGGACGGAGGG | 4.36 | - | - | - | - | - | - | - | - | - |
sof-miR-Seq409 | GAAACGAATCTTTTAAGTCTAATT | AACTAGACTCAAAAGATTCATCTC | 3.11 | - | - | - | - | - | - | - | - | - |
sof-miR-Seq468 | GATTAGTCACGATTAGTCGTCCGA | AGATCGGACGACTAATCGCGATTA | - | - | - | - | - | - | - | - | 0.77 | - |
sof-miR-Seq488 | GCGTGCAAGGAGCCAAGCATG | TGCCTGGCTCCCTGTATGCCA | - | - | 572.49 | 482.28 | 497.41 | 570.24 | - | - | - | - |
sof-miR-Seq501 | GGCATGGGAACATGTAGGAAGG | TTCCTGATGCCTCCCATGCCTA | 11.21 | - | - | - | - | - | - | - | - | - |
sof-miR-Seq504 | GGGAGCAATTCGTCGAACAGC | AGCTGTTCGACGAATGCCTCC | 123.30 | - | - | - | - | - | - | - | - | - |
sof-miR-Seq509 | GGGCCCAAATAGCAAGTGTTGTGA | CTCACAACACTTGCTATTTGGG | - | - | - | - | - | - | 1.48 | - | 2.01 | 0.96 |
sof-miR-Seq511 | GGGCGGTCACCTTGGCTAGC | TAGCCAAGGATGACTTGCCT | 132.64 | - | - | - | - | - | - | - | 26.48 | - |
sof-miR-Seq513 | GGGGGCGGACTGGGAACACAT | TGTGTTCTCAGGTCGCCCCCG | - | - | - | - | - | - | - | 3404.36 | - | - |
sof-miR-Seq536 | GTGCGGTTCTCCTCTGGCATG | TGCCAAAGGAGAATTGCCCTG | - | - | - | - | - | - | 1.93 | - | - | - |
sof-miR-Seq538 | GTGGCAGTAGAATTAATGAAGGGA | TTCTATCTCTATTAATTGTGTTGC | - | 12.53 | - | - | - | - | - | 1.62 | - | - |
sof-miR-Seq565 | GTTTTTCTCGCCGGGTGAGAAGGC | ATTCTCACTTGGGCGACGGAAAGG | - | 3.13 | - | - | - | - | - | - | - | - |
sof-miR-Seq568 | TAACAAGTTTAGGGATCTAGA | TTTTGGGTCCCTAAACTTGTT | - | - | 2.47 | 3.30 | - | - | - | - | - | 0.80 |
sof-miR-Seq587 | TAGCATGTTCCTCCTAAGAGC | TTCTTGGGAGGAGCATGCTAG | 18.68 | - | - | - | - | - | - | - | - | - |
sof-miR-Seq594 | TATCTAGAAAAGCTAAAACGT | GATGTTTTGGGTTTTCTAGAT | - | - | - | - | - | - | 0.74 | - | - | - |
sof-miR-Seq598 | TATTTGTGGACTCATGGACAT | GTCCGTGAGTCCACAAATAGG | 3.11 | 3.13 | - | - | - | - | 1.78 | - | 2.48 | 1.76 |
sof-miR-Seq610 | TCCATTCCAAATTGTAAGATG | GTCTTATAATTTGGAATGGAG | 30.51 | 6.89 | - | - | - | - | - | - | - | - |
sof-miR-Seq648 | TGGATGTACCAAAAAAGTCAAAGC | GTCGCTTTGACTTTTTTGGTACAT | - | - | - | - | - | - | - | 3.24 | - | - |
sof-miR-Seq656 | TGGGCGGTCACCTTGGCTAGC | TAGCCAAGGATGACTTGCCTA | - | 65.13 | 27.51 | 38.64 | 72.99 | 62.81 | - | - | - | - |
sof-miR-Seq670 | TGTTGAGGCTGGAGCGAAACTCGG | CAAGTTTGGTTTTGGTAATTAATG | - | 12.53 | - | - | - | - | - | - | - | - |
sof-miR-Seq678 | TTAGCGTCAAGAGACGAACACACT | AAGTGTGTTCCTCTATTTGACGCT | - | 3.76 | - | - | - | - | 4.74 | 6.49 | 2.79 | 7.53 |
sof-miR-Seq700 | TTGTGAGAGAAAAATACTGTTGGC | AACGAACAGTATTTTTCTCTTACA | - | 16.28 | - | - | - | - | - | - | - | - |
sof-miR-Seq720 | TTTTTGGTACATTGAATTTGC | AATTCGATGTACCAAAAAAGT | - | 11.27 | - | - | - | - | - | - | - | - |