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Table 1 Sequencing and assembly statistics

From: De novo transcriptome sequencing in a songbird, the dark-eyed junco (Junco hyemalis): genomic tools for an ecological model system

 

Number

Length

Average Length

Reads

1.17 million

434 million

372

Contigs

40,564

35.8 million

884

Singletons

166,177

57.1 million

344

Isotigs

31,739

NA

1,248

Isogroups

22,765

NA

NA

  1. Sequencing reads were assembled into contigs which were further grouped into isotigs and isogroups (see text for details).
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BMC Genomics

ISSN: 1471-2164

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