Table 6 Novel baboon miRNAs categorized by diet and LDL-C. The numbers of predicted target genes, and the 2-7mer seed region for each novel miRNA, are shown
Chow diet | |||
|---|---|---|---|
High LDL-C | Low LDL-C | ||
‘Seed’ | No. of targets | ‘Seed’ | No. of targets |
GGGTGCG | 37 | ACCTCGA | 6 |
TAAGAAC | 423 | TGGAATA | 315 |
TGGACGT | 8 | TTATAAT | 826 |
TTGACTA | 111 | Â | Â |
Total unique targets | 561 | Total unique targets | 1079 |
HCHF diet | |||
High LDL-C | Low LDL-C | ||
‘Seed’ | No. of targets | ‘Seed’ | No. of targets |
CCCAAAT | 306 | TTCTGAT | 441 |
CCCGCGG | 6 | TGGACGT | 8 |
AGAGCTT | 575 | GCGCTGG | 15 |
TTTTGCT | 149 | Â | Â |
ACCTCGA | 6 | Â | Â |
CTACCCC | 59 | Â | Â |
CTGTGAG | 14 | Â | Â |
Total unique targets | 902 | Total unique targets | 416 |
Both diets | |||
High LDL-C | Low LDL-C | ||
‘Seed’ | No. of targets | ‘Seed’ | No. of targets |
ATCAAGG | 147 | ATCAAGG | 147 |
CCGCCCT | 14 | CCGCCCT | 14 |
TTTTTGC | 349 | CAGGCAC | 402 |
CAGGCAC | 402 | Â | Â |
TTGTTGC | 179 | Â | Â |
Total unique targets | 985 | Total unique targets | 552 |