Skip to main content
Figure 2 | BMC Genomics

Figure 2

From: Quantitative RNA-Seq analysis in non-model species: assessing transcriptome assemblies as a scaffold and the utility of evolutionary divergent genomic reference species

Figure 2

Assessment of TA quality using genomic information. a) the total size (kbp) of the TAs compared to the CCDS, adjusted so only the contig sequence that aligns to a CCDS is included; b) the total number of genes represented in each TA compared to the CCDS; c) the mean and median CRR (coverage of CCDS) in a TA; and d) the number of CCDS transcripts that have equal or greater than 90% CRR in the TA.

Back to article page

BMC Genomics

ISSN: 1471-2164

Contact us