Table 6 Description of the differentially-expressed genes detected between High and Low groups with fold change ≥ 1.5 and p-value ≤0.005
From: Liver transcriptome profile in pigs with extreme phenotypes of intramuscular fatty acid composition
Ensembl_Gene_Id | Human homolog | Fold change | p-value | q-value | Gene biotype |
|---|---|---|---|---|---|
ENSSSCG00000010610 | GSTO1 | 3.8 | 1.1 x 10-16 | 2.2x10-13 | protein_coding |
ENSSSCG00000010992 | AQP7 | −6.7 | 3.0 x 10-13 | 2.9 x 10-10 | protein_coding |
ENSSSCG00000016401 | KIF1A | −12.5 | 2.2 x 10-11 | 1.4 x 10-8 | protein_coding |
ENSSSCG00000010488 | CYP2C9 | 2.5 | 1.3 x 10-8 | 6.3 x 10-6 | protein_coding |
ENSSSCG00000013865 | NWD1 | 16.2 | 5.2 x 10-7 | 2.0 x 10-4 | protein_coding |
ENSSSCG00000012015 | C21orf91 | 20.4 | 1.0 x 10-6 | 3.0 x 10-4 | protein_coding |
ENSSSCG00000007873 | -- | −3.7 | 1.4 x 10-6 | 4.0 x 10-4 | protein_coding |
ENSSSCG00000009871 | SDS | 2.2 | 7.8 x 10-6 | 2.0 x 10-3 | protein_coding |
ENSSSCG00000002383 | FOS | −2.0 | 1.3 x 10-5 | 3.0 x 10-3 | protein_coding |
ENSSSCG00000019010 | -- | −14.3 | 1.6 x 10-5 | 3.0 x 10-3 | snRNA |
ENSSSCG00000000044 | C22orf32 | −3.8 | 1.8 x 10-5 | 3.0 x 10-3 | protein_coding |
ENSSSCG00000003891 | CYP4A11 | 2.1 | 3.2 x 10-5 | 1.0 x 10-2 | protein_coding |
ENSSSCG00000016238 | -- | 3.1 | 3.5 x 10-5 | 1.0 x 10-2 | pseudogene |
ENSSSCG00000011937 | MORC1 | 6.1 | 3.9 x 10-5 | 1.0 x 10-2 | protein_coding |
ENSSSCG00000010487 | CYP2C19 | 2.1 | 5.1 x 10-5 | 1.0 x 10-2 | protein_coding |
ENSSSCG00000006614 | THEM5 | 18.0 | 1.4 x 10-4 | 2.0 x 10-2 | protein_coding |
ENSSSCG00000005385 | NR4A3 | −2.7 | 1.4 x 10-4 | 2.0 x 10-2 | protein_coding |
ENSSSCG00000006580 | S100A2 | −3.7 | 2.2 x 10-4 | 2.0 x 10-2 | protein_coding |
ENSSSCG00000000231 | ANKRD33 | −2.6 | 3.0 x 10-4 | 3.0 x 10-2 | protein_coding |
ENSSSCG00000001642 | TBCC | −14.3 | 3.2 x 10-4 | 3.0 x 10-2 | protein_coding |
ENSSSCG00000003971 | -- | −2.0 | 3.3 x 10-4 | 3.0 x 10-2 | protein_coding |
ENSSSCG00000015294 | CR1 | −2.0 | 3.7 x 10-4 | 3.0 x 10-2 | protein_coding |
ENSSSCG00000006238 | CYP7A1 | 2.1 | 5.6 x 10-4 | 5.0 x 10-2 | protein_coding |
ENSSSCG00000004789 | THBS1 | −1.7 | 6.0 x 10-4 | 5.0 x 10-2 | protein_coding |
ENSSSCG00000012832 | MXRA5 | −2.1 | 6.5 x 10-4 | 5.0 x 10-2 | protein_coding |
ENSSSCG00000004946 | ZWILCH | 2.2 | 6.7 x 10-4 | 5.0 x 10-2 | protein_coding |
ENSSSCG00000007888 | TNFRSF17 | −3.7 | 6.7 x 10-4 | 5.0 x 10-2 | protein_coding |
ENSSSCG00000008595 | APOB | 1.6 | 7.9 x 10-4 | 5.0 x 10-2 | protein_coding |
ENSSSCG00000014919 | ME3 | −2.3 | 8.4 x 10-4 | 6.0 x 10-2 | protein_coding |
ENSSSCG00000014368 | -- | −2.0 | 1.0 x 10-3 | 7.0 x 10-2 | protein_coding |
ENSSSCG00000007529 | SYCP2L | 2.6 | 1.0 x 10-3 | 7.0 x 10-2 | protein_coding |
ENSSSCG00000013116 | -- | 16.4 | 1.1 x 10-3 | 7.0 x 10-2 | protein_coding |
ENSSSCG00000004052 | FNDC1 | −1.8 | 1.2 x 10-3 | 7.0 x 10-2 | protein_coding |
ENSSSCG00000002277 | SPTB | −4.0 | 1.2 x 10-3 | 7.0 x 10-2 | protein_coding |
ENSSSCG00000016645 | C7orf53 | −7.7 | 1.3 x 10-3 | 7.0 x 10-2 | protein_coding |
ENSSSCG00000008203 | IGKV2-40 | −1.8 | 1.3 x 10-3 | 7.0 x 10-2 | protein_coding |
ENSSSCG00000001229 | -- | −2.0 | 1.3 x 10-3 | 7.0 x 10-2 | protein_coding |
ENSSSCG00000000151 | APOL6 | 3.4 | 1.5 x 10-3 | 8.0 x 10-2 | protein_coding |
ENSSSCG00000004170 | -- | 2.2 | 1.9 x 10-3 | 8.0 x 10-2 | pseudogene |
ENSSSCG00000016190 | SLC11A1 | −3.8 | 1.9 x 10-3 | 8.0 x 10-2 | protein_coding |
ENSSSCG00000006355 | APOA2 | 1.8 | 1.9 x 10-3 | 8.0 x 10-2 | protein_coding |
ENSSSCG00000015747 | MYOM2 | 2.8 | 2.3 x 10-3 | 9.0 x 10-2 | protein_coding |
ENSSSCG00000014824 | RELT | −12.5 | 2.7 x 10-3 | 9.0 x 10-2 | protein_coding |
ENSSSCG00000008455 | ABCG8 | 17.1 | 2.7 x 10-3 | 9.0 x 10-2 | protein_coding |
ENSSSCG00000003777 | SLC44A5 | 2.6 | 2.8 x 10-3 | 9.0 x 10-2 | protein_coding |
ENSSSCG00000003999 | A1BG | −5.9 | 2.8 x 10-3 | 9.0 x 10-2 | protein_coding |
ENSSSCG00000002375 | RPS6KL1 | −2.2 | 3.2 x 10-3 | 1.3 x 10-1 | protein_coding |
ENSSSCG00000001006 | TUBB2B | −2.9 | 3.4 x 10-3 | 1.4 x 10-1 | protein_coding |
ENSSSCG00000007478 | ATP9A | −1.8 | 3.5 x 10-3 | 1.4 x 10-1 | protein_coding |
ENSSSCG00000009992 | UQCR10 | 1.8 | 3.9 x 10-3 | 1.6 x 10-1 | protein_coding |
ENSSSCG00000010829 | MOSC1 | 1.7 | 4.0 x 10-3 | 1.6 x 10-1 | protein_coding |
ENSSSCG00000017923 | ALOX15 | −3.0 | 4.3 x 10-3 | 1.6 x 10-1 | protein_coding |
ENSSSCG00000002847 | GPT2 | 1.7 | 4.6 x 10-3 | 1.7 x 10-1 | protein_coding |
ENSSSCG00000004787 | GPR176 | 3.0 | 4.7 x 10-3 | 1.7 x 10-1 | protein_coding |
ENSSSCG00000006985 | MTMR7 | 1.7 | 4.8 x 10-3 | 1.7 x 10-1 | protein_coding |
ENSSSCG00000000709 | PLEKHG6 | −1.9 | 5.0 x 10-3 | 1.7 x 10-1 | protein_coding |
ENSSSCG00000010892 | KCNT2 | 2.0 | 5.0 x 10-3 | 1.7 x 10-1 | protein_coding |
ENSSSCG00000008624 | LPIN1 | 1.6 | 5.0 x 10-3 | 1.7 x 10-1 | protein_coding |