Type of Reads/k-mer value* | CM334 | Maor | Early Jalapeño | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
 | Total No. of Contigs | No. Contigs >1 KB | Percent Contigs > 1 KB | N50 | Total No. of Contigs | No. Contigs > 1 KB | Percent Contigs > 1 KB | N50 | Total No. of Contigs | No. Contigs > 1 KB | Percent Contigs > 1 KB | N50 |
Untrimmed/K31 | 65,337 | 52,179 | 80 | 603 | 62,570 | 50,306 | 80 | 589 | 68,737 | 57,077 | 83 | 497 |
Untrimmed/K35 | 64,096 | 49,875 | 78 | 680 | 61,561 | 48,345 | 79 | 660 | 68,237 | 55,564 | 81 | 562 |
Untrimmed/K41 | 52,099 | 36,770 | 71 | 947 | 50,290 | 35,900 | 71 | 926 | 58,431 | 44,045 | 75 | 777 |
Trimmed 25–70/K31 | 42,310 | 30,628 | 72 | 864 | 36,173 | 24,871 | 69 | 995 | 39,956 | 28,711 | 72 | 870 |
Trimmed 25–70/K35 | 34,525 | 22,627 | 66 | 1,109 | 30,202 | 18,859 | 62 | 1,205 | 34,497 | 23,039 | 67 | 1,057 |
Trimmed 25–70/K41 | 27,439 | 16,728 | 61 | 1,239 | 26,885 | 16,660 | 62 | 1223 | 28,588 | 18,162 | 64 | 1,165 |