Table 2 TF genes that were unaffected by BPH and those that showed constitutive differential expression in RHT (FC>10, P <0.05)

1

bHLH

Os01g0108400

60.02

U

30.02

U

59.83

U

2

MYB-related

Os07g0634900

584.50

U

1219.35

U

216.66

U

3

C3H

Os01g0192000

24.32

U

25.73

U

25.62

U

4

FAR1

Os05g0128700

20.44

D

106.39

D

29.94

D

5

FAR1

Os04g0316800

10.96

D

12.35

D

17.78

D

6

GNAT

Os08g0260000

9.35

D

9.66

D

12.28

D

7

MADS

Os08g0112700

9.61

U

37.64

U

23.08

U

8

MADS

Os04g0387500

12.88

D

41.15

D

13.56

D

9

mTERF

Os06g0224400

7.50

D

6.11

D

23.84

D

10

GNAT

Os02g0806000

14.71

U

21.75

U

19.65

U

11

Orphans

Os01g0530300

6.53

U

5.20

U

50.91

U

12

TRAF

Os03g0667100

223.89

D

118.10

D

110.88

D

13

TRAF

Os08g0227200

21.53

U

33.62

U

17.75

U

14

bHLH

Os04g0301500

5.53

D

13.20

D

2.85

D

15

bZIP

Os01g0859500

10.39

D

6.31

D

1.17

U

16

FAR1

Os08g0389800

25.22

U

4.59

U

1.56

U

17

FAR1

Os06g0246700

10.18

D

1.50

U

1.35

U

18

Orphans

LOC_Os04g13480.1

25.93

U

1.16

D

3.73

U

19

Tify

Os09g0439200

4.82

U

7.20

U

30.32

U

20

TRAF

LOC_Os08g41240.1

4.41

D

3.97

D

10.30

D

21

MYB

Os02g0624300

2.17

D

11.48

D

4.38

D

22

ARF

Os04g0664400

1.99

U

14.99

D

4.05

U

23

NAC

Os01g0339500

1.70

D

1.64

U

10.83

D

24

SET

Os08g0244400

1.92

U

18.66

U

8.11

U

25

TCP

Os03g0706500

1.36

D

11.25

D

2.18

U

26

Tify

Os04g0395800

1.10

U

14.08

D

1.20

D