Table 1 Mitogenome organization of the two Sinochlora species
Feature | Strand | Position | Initiation codon | Stop codon | Anticodon | |||
|---|---|---|---|---|---|---|---|---|
| Â | Â | Sl | Sr | Sl | Sr | Sl | Sr | Â |
trnI | J | 1-66(+5) | 1-66(+5) | Â | Â | Â | Â | GAT |
trnM | J | 72-138(-3) | 72-138(0) | Â | Â | Â | Â | CAT |
nad2 | J | 139-1161(0) | 139-1161(0) | ATA | ATA | TAA | TAA | Â |
ATR | —— | 1162-2552(0) | 1162-2547(0) |  |  |  |  |  |
TRU | —— | 2553-4281(+33) | 2548-3419(+33)* |  |  |  |  |  |
trnQ | N | 4383-4315(+35) | 3521-3453(+36) | Â | Â | Â | Â | TTG |
trnW | J | 4419-4484(-1) | 3558-3623(-1) | Â | Â | Â | Â | TCA |
trnC | N | 4547-4484(+2) | 3687-3623(+3) | Â | Â | Â | Â | GCA |
trnY | N | 4616-4550(+16) | 3757-3691(+16) | Â | Â | Â | Â | GTA |
cox1 | J | 4633-6148(0) | 3774-5289(0) | TCT | TCT | T | T | Â |
trn L(UUR) | J | 6149-6212(+2) | 5290-5353(+2) | Â | Â | Â | Â | TAA |
cox2 | J | 6215-6905(0) | 5356-6045(+1) | ATG | ATG | T | TAA | Â |
trnK | J | 6906-6975(-1) | 6047-6116(-1) | Â | Â | Â | Â | CTT |
trnD | J | 6975-7042(0) | 6116-6183(0) | Â | Â | Â | Â | GTC |
atp8 | J | 7043-7207(-7) | 6184-6348(-7) | ATC | ATC | TAA | TAA | Â |
atp6 | J | 7201-7875(+2) | 6342-7015(0) | ATG | ATG | TAA | TA | Â |
cox3 | J | 7878-8678(0) | 7016-7815(0) | ATG | ATG | TAA | TA | Â |
trnG | J | 8679-8742(0) | 7816-7880(0) | Â | Â | Â | Â | TCC |
nad3 | J | 8743-9096(+6) | 7881-8234(+7) | ATC | ATC | TAA | TAA | Â |
trnA | J | 9103-9170(-1) | 8242-8308(-1) | Â | Â | Â | Â | TGC |
trnR | J | 9170-9232(+4) | 8308-8370(+4) | Â | Â | Â | Â | TCG |
trnN | J | 9237-9302(0) | 8375-8440(0) | Â | Â | Â | Â | GTT |
trnS (AGN) | J | 9303-9369(0) | 8441-8507(0) | Â | Â | Â | Â | GCT |
trnE | J | 9370-9435(-2) | 8508-8573(-2) | Â | Â | Â | Â | TTC |
trnF | N | 9496-9434(0) | 8634-8572(0) | Â | Â | Â | Â | GAA |
nad5 | N | 11213-9497(0) | 10351-8635(0) | ATA | ATA | T | T | Â |
trnH | N | 11278-11214(0) | 10416-10352(0) | Â | Â | Â | Â | GTG |
nad4 | N | 12614-11279(-7) | 11752-10417(-7) | ATG | ATG | T | T | Â |
nad4L | N | 12907-12608(+1) | 12045-11746(+10) | ATA | ATA | TAA | TAA | Â |
trnT | J | 12909-12972(-1) | 12056-12119(-1) | Â | Â | Â | Â | TGT |
trnP | N | 13040-12972(0) | 12187-12119(0) | Â | Â | Â | Â | TGG |
nad6 | J | 13041-13558(0) | 12188-12705(0) | CTG | TTG | TA | TA | Â |
cob | J | 13559-14693(0) | 12706-13840(0) | ATG | ATG | T | T | Â |
trnS(UCN) | J | 14694-14762(+161) | 13841-13908(+94) | Â | Â | Â | Â | TGA |
nad1 | N | 15862-14924(+3) | 14941-14003(+3) | ATT | ATT | TAG | TAG | Â |
trnL(CUN) | N | 15928-15866(-1) | 15007-14945(0) | Â | Â | Â | Â | TAG |
rrnL | N | 17230-15928(-2) | 16307-15008(0) | Â | Â | Â | Â | Â |
trnV | N | 17300-17229(0) | 16378-16308(0) | Â | Â | Â | Â | TAC |
rrnS | N | 18083-17301(+50) | 17159-16379(+50) | Â | Â | Â | Â | Â |