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Table 4 Primers used for qRT-PCR analysis

From: Quality assessment and data handling methods for Affymetrix Gene 1.0 ST arrays with variable RNA integrity

Test genes

Forward primers (5' - 3')

Reverse primers (5' - 3')

Product (bp)

dpep1

GACAACTGGCTGGTGGACA

ACCACACGCTGCCCAAA

74

cldn1

GCTGTCATTGGGGGTGCGAT

GGCAACTAAAATAGCCAGACCTGC

54

Reference genes

   

ubc

GGTCGCAGTTCTTGTTTGTGG

CACGAAGATCTGCATTGTCAAG

59

b2m

TGCTGTCTCCATGTTTGATGTATCT

TCTCTGCTCCCCACCTCTAAGT

86

atp5e

CTGGACTCAGCTACATCCGA

GCATCTCTCACTGCTTTTGCAC

55