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Table 1 Overview of the MSRs studied

From: Genome-wide analysis of macrosatellite repeat copy number variation in worldwide populations: evidence for differences and commonalities in size distributions and size restrictions

Name

Locus (hg18)

Unit (kb)

Restriction enzyme

Encoded product

RS447

4p16.1

4.7

BamHI

deubiquitinating enzyme (USP17)

MSR5p

5p15.1

3.4

HindIII

RNA polymerase-like

FLJ40296

13q21.1

6.6

HindIII

proline rich protein 20

RNU2

17q21-22

6.1

EcoRI

non-coding U2 small nuclear RNA

DXZ4

Xq23

3.0

EcoRI

long non-coding RNA

CT47

Xq24

4.8

EcoRI

cancer testis antigen 47

D4Z4 (4q)

4q35.2

3.3

EH/EB/Xa

DUX4

D4Z4 (10q)

10q26.3

3.3

EH/EB/Xa

DUX4-like

  1. aEH/EB/X = EcoRI + HindIII/EcoRI + BlnI/XapI.