Skeletal muscle | Intestine | Blood | HK-38 | HK-105 | |
---|---|---|---|---|---|
Pyrosequencing reads | |||||
High-quality reads | 447,166 | 614,899 | 576,796 | 577,112 | 729,941 |
Average read length (bp) | 294 | 304 | 290 | 349 | 320 |
Total Megabases | 131.5 | 186.9 | 167.3 | 201.4 | 233.6 |
Assembly statistics | |||||
Number of contigs | 7,808 | 9,475 | 12,003 | 14,008 | 12,474 |
Reads assembled | 314,628 | 482,080 | 389,934 | 392,195 | 508,826 |
Average contig length (bp) | 968 | 1,090 | 831 | 1,059 | 1,148 |
Number of singletons | 48,750 | 80,527 | 114,984 | 105,431 | 91,885 |
Average singleton length (nt) | 316 | 298 | 284 | 318 | 334 |
Total consensus Megabases | 23.0 | 34.3 | 42.7 | 48.4 | 45.0 |
Average sequences coverage | 6.4 | 6.3 | 4.0 | 4.2 | 5.8 |