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Table 3 A list of early stage-specific HLB responsive genes

From: Transcriptome comparison and gene coexpression network analysis provide a systems view of citrus response to ‘CandidatusLiberibacter asiaticus’ infection

Probeset ID

FC

AtGID

Arabidopsis gene annotation

Up-regulated

   

Cit.12388.1.S1_at

2.1

AT2G40095

unknown protein

Cit.13969.1.S1_s_at

2.1

AT5G52640

ATHSP90.1 (HEAT SHOCK PROTEIN 90.1); ATP binding / unfolded protein binding

Cit.15958.1.S1_at

2.3

AT2G26560

PLA2A (PHOSPHOLIPASE A 2A); lipase/ nutrient reservoir

Cit.16156.1.S1_at

2.7

AT5G41330

potassium channel tetramerisation domain-containing protein

Cit.16537.1.S1_at

2.4

AT2G32030

GCN5-related N-acetyltransferase (GT) family protein

Cit.17187.1.S1_at

2.7

AT1G05575

unknown protein

Cit.17310.1.S1_s_at

2.2

AT1G32170

XTR4 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 4); hydrolase, acting on glycosyl bonds

Cit.17450.1.S1_s_at

2.7

AT2G46330

AGP16 (ARABINOGALACTAN PROTEIN 16)

Cit.18156.1.S1_at

2.2

AT3G02840

Immediate-early fungal elicitor family protein

Cit.18603.1.S1_at

2.5

  

Cit.18603.1.S1_s_at

2.1

  

Cit.1968.1.S1_s_at

2.4

AT1G61680

TPS14 (TERPENE SYNTHASE 14); S-lilool synthase

Cit.23171.1.S1_x_at

2.0

AT3G22120

CWLP (CELL WALL-PLASMA MEMBRANE LINKER PROTEIN); lipid binding

Cit.24979.1.S1_at

2.5

  

Cit.29504.1.S1_s_at

3.8

AT4G20820

FAD-binding domain-containing protein

Cit.29533.1.S1_s_at

2.6

AT5G47230

ERF5 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 5); D binding / transcription activator/ transcription factor

Cit.31964.1.S1_at

2.2

  

Cit.33263.1.S1_at

2.3

  

Cit.33335.1.S1_s_at

2.4

AT3G22120

CWLP (CELL WALL-PLASMA MEMBRANE LINKER PROTEIN); lipid binding

Cit.34429.1.S1_s_at

2.8

AT5G08350

GRAM domain-containing protein / ABA-responsive protein-related

Cit.3449.1.S1_at

2.3

AT1G01720

ATAF1; transcription activator/ transcription factor

Cit.3449.1.S1_s_at

2.4

AT1G01720

ATAF1; transcription activator/ transcription factor

Cit.3450.1.S1_at

2.5

AT1G01720

ATAF1; transcription activator/ transcription factor

Cit.35345.1.S1_s_at

2.1

AT3G28340

GATL10 (Galacturonosyltransferase-like 10); polygalacturote 4-alpha-galacturonosyltransferase/ transferase, transferring hexo

Cit.4259.1.S1_at

2.2

AT1G14870

Response to oxidative stress; LOCATED IN: plasma membrane

Cit.4690.1.S1_at

2.8

AT5G07990

TT7 (TRANSPARENT TESTA 7); flavonoid 3'-monooxygese/ oxygen binding

Cit.9944.1.S1_x_at

2.1

AT4G37990

ELI3-2 (ELICITOR-ACTIVATED GENE 3–2); aryl-alcohol dehydrogese/ mannitol dehydrogese

Down-regulated

   

Cit.16792.1.S1_at

2.1

AT3G57040

ARR9 (RESPONSE REGULATOR 9); transcription regulator/two-component response regulator

Cit.18730.1.S1_at

2.1

  

Cit.23498.1.S1_s_at

2.2

AT3G12750

ZIP1 (ZINC TRANSPORTER 1 PRECURSOR); zinc ion transmembrane transporter

Cit.30425.1.S1_x_at

2.2

AT3G12500

AthCHIB (Arabidopsis BASIC CHITINASE); chitinase

Cit.38866.1.S1_at

2.5

  

Cit.5121.1.S1_at

2.3

AT5G57685

AtGDU3 (Arabidopsis GLUTAMINE DUMPER 3)

Cit.7043.1.S1_at

3.3

AT1G17860

Trypsin and protease inhibitor family protein/Kunitz family protein

  1. FC, fold changes; AtGID, Arabidopsis gene ID.