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Table 3 Genetic diversity estimates from loci that were successfully genotyped using HRM analysis

From: Novel genomic resources for a climate change sensitive mammal: characterization of the American pika transcriptome

Locus

HO/HE

BC high

BC low

Oregon high

Oregon low

Ocp687

0.33/0.28

0.25/0.47

0.00/0.00

0.00/0.00

Ocp2098

0.00/0.00

0.50/0.50

0.00/0.00

0.00/0.00

Ocp4162

0.29/0.49

0.00/0.00

0.00/0.00

0.00/0.50*

Ocp4280

0.00/0.00

1.00/0.50*

0.22/0.35

0.33/0.44

Ocp4649 a

0.00/0.44

0.25/0.22

0.33/0.28

0.00/0.44

Ocp5210

0.67/0.44

0.75/0.47

0.00/0.00

0.00/0.49*

Ocp6361

0.00/0.00

0.00/0.38*

0.00/0.00

0.00/0.44

Ocp6774

1.00/0.50

0.00/0.00

0.00/0.00

0.00/0.28

Ocp7498

0.67/0.44

0.00/0.00

0.43/0.34

0.60/0.42

Ocp8183

0.00/0.44

0.75/0.47

0.00/0.00

0.00/0.00

Ocp8469

0.33/0.28

0.25/0.22

0.00/0.24

0.00/0.00

Ocp14764

0.67/0.44

0.00/0.00

0.43/0.34

0.29/0.24

Ocp15503

0.67/0.44

0.00/0.00

0.00/0.00

0.00/0.00

Ocp15508

0.11/0.28

0.11/0.10

0.00/0.00

0.00/0.00

Ocp17339

0.00/0.00

0.25/0.47

0.43/0.34

0.29/0.41

Ocp102174

0.11/0.28

0.30/0.46

0.00/0.00

0.00/0.00

Ocp102175

0.29/0.41

0.11/0.28

0.33/0.50

0.00/0.00

  1. * Significant deviation from HWE; bold denotes that the locus was monomorphic in that population.
  2. a X-linked locus.