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Table 4 Comparison of immune-related genes in Ant-alus and Sens-alus

From: A gene expression restriction network mediated by sense and antisense Alu sequences located on protein-coding messenger RNAs

 

Ant-alus

Sens-alus

 

Gene symbol

RefSeq accession

  Gene symbol

RefSeq accession

V(D)J recombination

  

DCLRE1C

NM_001033855.1

Toll like receptors

  

TLR6

NM_006068.3

   

TLR7

NM_016562.3

   

TLR10

NM_030956.2

Interferon related

  

IRF1

NM_002198.2

   

IFIT3

NM_001031683.2; NM_001549.4

Cytokines

IL11

NM_000641.2

IL1R1

NM_000877.2

 

IL28RA

NM_170743.2;

IL2RA

NM_000417.2

  

NM_173064.1;

  
  

NM_173065.1

  
 

IFNAR2

NM_207585.1

IL6R

NM_000565.2 ; NM_181359.1

   

IL10

NM_000628.3

   

IL10RB

NM_000628.3

   

IL13RA1

NM_001560.2

   

IL17RA

NM_014339.4

   

IL18

NM_001562.2

   

IL23R

NM_144701.2

   

CSF2RA

NM_006140.4;

    

NM_172245.2;

    

NM_172246.2;

    

NM_172247.2;

    

NM_172249.2;

    

NM_001161529.1;

    

NM_001161530.1;

    

NM_001161532.1;

Chemokines

CCL22

NM_002990.3

CCL5

NM_002985.2

 

CXCL16

NM_022059.2

CCR6

NM_031409.3;

    

NM_004367.5

Cluster of differentiation

CD24

NM_013230.2

CD28

NM_006139.2

 

CD302

NM_014880.4

CD36

NM_001001548.2

   

CD82

NM_002231.3;

    

NM_001024844.1

   

CD84

NM_003874.2

   

CD96

NM_198196.2 ;

    

NM_005816.4

   

CD109

NM_133493.3;

    

NM_001159587.1;

    

NM_001159588.1

   

SLAMF6

NM_052931.3

   

SLAMF7

NM_021181.3

HLA and related receptors

FCAR

NM_133279.2

HLA-DOA

NM_002119.3

 

FCGR2A

NM_021642.3;

HLA-E

NM_005516.4

  

NM_001136219.1

  
   

LILRB1

NM_006669.3;

    

NM_001081637.1;

    

NM_001081638.1;

    

NM_001081639.1

   

LILRB3

NM_001081450.1;

    

NM_006864.2;

Transcription factors

  

NFATC3

NM_173164.1

   

NFATC2IP

NM_032815.3

   

NFKBIB

NM_001001716.1

   

TONSL (NFKBIL2)

NM_013432.4

   

NKIRAS2

NM_001001349.2;

    

NM_017595.5;

    

NM_001144927.1;

    

NM_001144928.1;

    

NM_001144929.1

Others

NLRC3

NM_178844.2

PCM1

NM_006197.3

   

DDX51

NM_175066.3