Figure 2
From: Optimizing de novo assembly of short-read RNA-seq data for phylogenomics
Parameters for choosing the representative transcript for each locus in Oases. (A) Only considering transcripts that are longer than 0.3 of the longest transcript in the same locus; (B) only considering transcripts that are longer than 0.85 of the longest transcript in the same locus. A data point is plotted only when there are five or more loci of the same size in each data set.