Table 4 Ferulic acid-responsive transcripts related to ROS
From: Autotoxicity mechanism of Oryza sativa: transcriptome response in rice roots exposed to ferulic acid
| Â | Short exposures | Long exposures | |||||
|---|---|---|---|---|---|---|---|
Functional categories | In genome | On arrary | Detected | Increased a | Decreased | Increased | Decreased |
Reactive oxygen species (ROS) network | 343 | 323 | 270 | 51 | 4 | 5 | 2 |
AOX (Alternative oxidases) genes | 4 | 4 | 4 | 4* | 0 | 0 | 0 |
APx (Ascorbate peroxidase) genes | 11 | 11 | 8 | 0 | 0 | 0 | 0 |
Cat (Catalase) genes | 3 | 3 | 3 | 0 | 0 | 0 | 0 |
DiOx (Alpha-dioxygenase) | 1 | 1 | 1 | 0 | 0 | 0 | 0 |
Ferritin genes | 2 | 2 | 2 | 0 | 0 | 0 | 0 |
GPx(Glutathione peroxidase) genes | 5 | 5 | 5 | 1 | 0 | 0 | 0 |
GR (Glutathione reductase) genes | 3 | 3 | 3 | 2 | 0 | 0 | 0 |
Grx (Glutaredoxins) genes | 27 | 22 | 17 | 5 | 0 | 0 | 0 |
GST (Glutathione-S-transferases) genes | 79 | 74 | 67 | 25* | 0 | 3 | 2 |
MDAR (monodehydroascorbate reductase) genes | 15 | 14 | 8 | 2 | 0 | 0 | 0 |
Prx (Class III Peroxidase) genes | 138 | 130 | 103 | 7* | 4 | 2 | 0 |
PrxR(Peroxiredoxin) genes | 8 | 8 | 7 | 2 | 0 | 0 | 0 |
Rboh (Respiratory burst oxidase homolog; NADPH oxidase) genes | 9 | 9 | 7 | 1 | 0 | 0 | 0 |
SOD (superoxide dismutase) genes | 8 | 8 | 8 | 0 | 0 | 0 | 0 |
Trx (thioredoxin) genes | 30 | 29 | 27 | 2 | 0 | 0 | 0 |