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Table 3 Major gene ontology biological process classifications represented by genes differentially expressed between control quarters from cows infected with S. aureus for 24 hours (SA24T0) and 72 hours (SA72T0)

From: Escherichia coli- and Staphylococcus aureus-induced mastitis differentially modulate transcriptional responses in neighbouring uninfected bovine mammary gland quarters

Clone accession no.

Gene symbol

gene

Fold Difference

RESPONSE TO STRESS

SA24T0 > SA72T0

  

CO891789

ASF1A

ASF1 anti-silencing function 1 homolog A

2.53

pCXCL10*

CXCL10

chemokine (C-X-C motif) ligand 10

3.28

AJ693004

CYP11A1

cytochrome P450, family 11, subfamily A, polypeptide 1

2.03

AM018876

FGA

fibrinogen alpha chain

2.03

pIL1B*

IL1B

interleukin 1, beta

2.72

AM037229

PENK

proenkephalin

2.23

BM256666

S100A8

S100 calcium binding protein A8 (calgranulin A)

2.19

BF655078

S100A12

S100 calcium binding protein A12 (calgranulin C)

2.29

AM031467

SOD2

superoxide dismutase 2, mitochondrial

2.30

CO875497

TP53BP1

tumor protein p53 binding protein 1

2.68

AM022673

XRCC2

X-ray repair complementing defective repair in Chinese hamster cells 2

3.22

SA72T0 > SA24T0

  

CK847668

BRCA2

breast cancer 2, early onset

3.47

CELL PROLIFERATION

  

SA24T0 > SA72T0

  

AM009066

ACSL6

acyl-CoA synthetase long-chain family member 6

3.27

pCXCL10*

CXCL10

chemokine (C-X-C motif) ligand 10

3.28

CO874867

CSRP2

cysteine and glycine-rich protein 2

2.26

AM018876

FGA

fibrinogen alpha chain

2.03

pIL1B*

IL1B

interleukin 1, beta

2.72

AM024609

STIL

SCL/TAL1 interrupting locus

2.69

SA72T0 > SA24T0

  

CK847668

BRCA2

breast cancer 2, early onset

3.47

BI680983

INHA

inhibin, alpha

2.63

AJ815547

IL7

interleukin 7

3.38

CELL DEVELOPMENT

  

SA24T0 > SA72T0

  

AM009066

ACSL6

acyl-CoA synthetase long-chain family member 6

3.27

CO874867

CSRP2

cysteine and glycine-rich protein 2

2.26

BM256725

GZMH

granzyme H

2.35

pIL1B*

IL1B

interleukin 1, beta

2.72

CO887046

LRRC4C

leucine rich repeat containing 4C

2.46

AM031467

SOD2

superoxide dismutase 2, mitochondrial

2.30

CO892784

ZEB2

zinc finger E-box binding homeobox 2

2.84

SA72T0 > SA24T0

  

AJ817391

AFF4

AF4/FMR2 family, member 4

3.20

CK847668

BRCA2

breast cancer 2, early onset

3.47

BI680983

INHA

inhibin, alpha

2.63

AJ815547

IL7

interleukin 7

3.38

IMMUNE RESPONSE

  

SA24T0 > SA72T0

  

AM011262

CTSG

cathepsin G

2.09

BF706666

CD4

CD4 molecule

4.50

pCXCL10*

CXCL10

chemokine (C-X-C motif) ligand 10

3.28

pFCGR3A*

FCGR3A

Fc fragment of IgG, low affinity IIIa, receptor (CD16)

3.09

AM023116

GBP4

guanylate binding protein 4

2.16

pIL1B*

IL1B

interleukin 1, beta

2.72

AM011258

LTF

lactotransferrin

3.48

SA72T0 > SA24T0

  

AJ815547

IL7

interleukin 7

3.38

DEFENSE RESPONSE

  

SA24T0 > SA72T0

  

pCXCL10*

CXCL10

chemokine (C-X-C motif) ligand 10

3.28

pIL1B*

IL1B

interleukin 1, beta

2.72

AM011258

LTF

lactotransferrin

3.48

AM037229

PENK

proenkephalin

2.23

BM256666

S100A8

S100 calcium binding protein A8 (calgranulin A)

2.19

BF655078

S100A12

S100 calcium binding protein A12 (calgranulin C)

2.29

  1. A single accession number is listed for genes represented by multiple clones. Average fold differences were calculated for superoxide dismutase 2, mitochondrial and lactotransferrin, which are represented by multiple clones. * pCXCL10, pFCGR3A and pIL1B are amplicons generated specifically for the Bov20K cDNA microarray.
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BMC Genomics

ISSN: 1471-2164

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