Table 4 Putative mobilome of Cronobacter genomes
Putative mobile element | Insertion site | Other elements at this chromosomal locus |
|---|---|---|
T6SS1 (Csak) | tRNA-Phe-GAA | Â |
T6SS2 (Csak, Cmal, Cuni, Cdublau, Ctur) | tRNA-Phe-GAA | GR 21, 88, 121 |
Transposon-Phage (Cuni) | tRNA-Met-CAT | GR 122 (Csak) |
Prophage (Cdublac, Ctur); small integron (Cmal) | tRNA-gly-CCC | GR 112 (Cuni) |
Prophage (Cdublac, Cmal, Ctur); tandem prophages (Cdubdub); Prophage-transposon (Cdublau); transposon (Cuni) | putative serine chemoreceptor protein gene | GR 16 |
Prophage (Csak) | large repetitive protein gene | Â |
IS (Cmuy) | yfgG | GR 104, 113 |
Prophage (Cdubdub, Cmal); transposon (Ctur) | tRNA-Arg-CCT | GR 69, 95 |
Prophage (Cdubdub, Csak) | tRNA-Pro-GGG | GR 17, 58, 68, 89, 96, 105, 114, 123 |
TE (Cmal) | hydroxyethylthiazole kinase gene | Â |
O-antigen region | galF-gnd | Â |
IS (Cmuy) | tRNA-Asn-GTT | GR 27 |
T6SS3 (missing in Cmuy) | tRNA-Asn-GTT | Â |
Prophage (Cdublau); T6SS4 with transposon interruption (Cdublau), or at end (Cdublac) | tRNA-Asn-GTT | Â |
Prophage (Cmal) | fliE | Â |
ICE (Cmuy) | msdB-pykA intergenic | Â |
Prophage (Cdubdub) | SraC/RyeA RNA | GR81 |
Prophage (Cmal); TE (Ctur) | ycgN | Â |
Transposon (Cdublau) | interruption GR 59 | Â |
Prophage (Cdublau, Cmuy, Csak) | ycjR-ycjS | Â |
Tellurium resistance transposon (Csak) | interruption GR 8 | Â |
Transposon (Cuni) | GR 30 | GR 92 |
Transposon (Cdubdub) | uvdE | Â |
IS600 (Cdub); Prophage (Cdublau) | ydcW intergenic | GR 31 (variable) |
Prophage (Cuni) | phnO intergenic | Â |
T6SS5 (highly variable, missing in Cdublac, Cmuy) | tRNA-Val-GAC | GR 33, 99 |
Copper-resistance transposon (Cuni (+ABC transporter), Cmuy); Prophage (Cmuy, Ctur) | icdA | GR 39, 48, 84, 87, 93, 116, 119 |
Prophage (Csak) | ycdX | Â |
Prophage (Cdublau) | mntR-ybiP intergenic | Â |
Prophages (Cuni, Csak, Ctur); T6SS6 (Cdub, Ctur, Csak - truncated) | tRNA-Arg-TCT | GR 11, 52, 85 |
Prophage (Csak); Transposon (Cmal), TE (Cdublau) | tRNA-Thr-CGT | Â |
TE (Cmal) | pilB | Â |
Prophage (Cdublac, Cmal); TE (Cdublau, Cdubdub, Cuni); Transposon (Cdublau) | tRNA-Leu-CAA | GR 110 |
ICE (Cuni) | large repetitive protein gene | Â |
T6SS7-repeat region (all, variable and conserved genes) | tpiA intergenic | Â |
Small integron (Csak) | yicC-yicG | Â |
Core OS variable region | kdtB-kbl | Â |
Prophage (Cmuy); TE (Cdubdub, Cuni) | tRNA-SeC(p)-TCA | Â |
Copper and silver-resistance transposon (Csak) | yhiN-puuA | Â |