The genome and transcriptome of the pine saprophyte Ophiostoma piceae, and a comparison with the bark beetle-associated pine pathogen Grosmannia clavigera

Table 2 Characteristics of the O. piceae (Op) genome assembly and annotation and a comparison with other related genomes

	Op	Gc^a	Nc (10)^b	Tr^c
Genome size (Mbp)	32.8	30	41	33.5
Number of scaffolds	45	289	7 ^d	87
N50 (Mbp)	1.45	2	1.56	1.12
Number of ungapped contigs	388	478	956	231
Genome GC content (%)	52.8	53.4	48.25	52.7
Non-coding genome (%)	54	54.28	56
Number of genes	8,884	8,312	9,733	9,129
Median CDS length (bp)	1,401	1,350	1,673	1,299
Exon GC content (%)	59.7	60.4		57.8

a. G. clavigera (Gc); b. Neurospora crassa Sequencing Project, Broad Institute of Harvard and MIT (NC10). c. Trichoderma reesei (Tr). d. Chromosome numbers.

ISSN: 1471-2164