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Table 1 Sample information

From: Large scale variation in DNA copy number in chicken breeds

Breed

Line

Breed code

Platform

# Samples

Relation

Red Jungle Fowl

Red Jungle Fowl

aviandiv_101

Aglilent 244K

4

unrelated (F0)

Exp.Layer brown

Compton_BrL

LineBrL

Aglilent 244K

5

unrelated (F0)

Exp. Layer white

Compton_6_sub1

Line61

Aglilent 244K

5

unrelated (F0)

Exp. Layer white

Eastlansing_6_sub3

Line63

Aglilent 244K

5

unrelated (F0)

Exp. Layer white

Compton-N

LineN

Aglilent 244K

5

unrelated (F0)

Exp. Layer white

Compton_15I

Line15I5

Aglilent 244K

5

unrelated (F0)

Exp. Layer white

Compton_7_sub2

Line72

Aglilent 244K

5

unrelated (F0)

Com. Broiler

commercial broiler_A

ComBroilA

Aglilent 244K

2

unrelated (F0)

Com. Broiler

commercial broiler_B

ComBroilB

Aglilent 244K

3

unrelated (F0)

Com. Broiler

commercial broiler _C

ComBroilC

Aglilent 244K

4

unrelated (F0)

Exp. Broiler

broiler_M

BroilM

Aglilent 244K

8

unrelated (F0)

Com.Layer brown

commercial layer brown_1

ComBrownL1

Aglilent 244K

4

unrelated (F0)

Com.Layer brown

commercial layer brown_2

ComBrownL2

Aglilent 244K

4

unrelated (F0)

Com.Layer white

commercial layer white

ComWhiteL

Aglilent 244K

2

unrelated (F0)

Silkie

Silkie

Silkie

Aglilent 244K

3

unrelated (F0)

total

   

64

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