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Table 5 Quantitative PCR primers and conditions

From: Gene expression differences during the heterogeneous progression of peripheral atherosclerosis in familial hypercholesterolemic swine

Probe Set ID

  Primer Sequence

Annealing Temp.(C)

Capturing Temp. (C)

Probe Size

Gene Identifier

Identity%

Ssc.15995.2.S1_at

GGCATCATGCTGAGTTACATC

58

82

106

KCNE1

100

AGTAAGCCTTGTCCTTCTCCTG

Ssc.10078.1.A1_at

CCTGAGCTGAGAGCCTAGATATG

58

79

113

PCSK5

99

TTGAATGGCTCCTCTTCAGG

 Ssc.1509.1.S1_at

GTTCCAGAACAGCTCGATCC

58

82

155

TNFRSF21

98

TGCATTGATTCCTTGTGCTC

Ssc.17846.1.A1_at

ACGACACAAGCACGTGAGG

58

85

157

IRX1

100

GGCAACGAAGTCAAGGACTC

Ssc.17896.1.A1_at

TCTCCTCCTTCTGCATCAGC

58

81

126

FHOD3

100

GCACATGGTCCGTTCTTCTC

Ssc.17896.2.S1_at

GGCAAGTTCTCTGGCAGTTC

58

84

100

FHOD3

98

TCAGCACAGCCTTCATGTTC

Ssc.19059.1.A1_at

TGCAGTAGCAGGTACAATGGAG

58

78

123

AGTR1

99

ACCTTGAGAGGAGCAACAGG

Ssc.12176.3.S1_at

AGAGTTCTTGCCTTCCTTCG

58

88

142

GPRC5C

99

AGGAGCTTACGACGTCATCC