KONAGAbase: a genomic and transcriptomic database for the diamondback moth, Plutella xylostella

BMC Genomics

Table 12 Number of putative ABC transporter genes in each ABC transporter family

ABC transporter family	No. of putative ABC transporter genes in DBM			No. of ABC transporter genes in Bombyx mori
ABC transporter family	DS1-UBH	DS2-UBH	DS2-PTB	No. of ABC transporter genes in Bombyx mori
ABCA	8	7	7	9
ABCB	18	11	11	9
ABCC	20	15	15	15
ABCD	2	2	2	2
ABCE	1	1	1	1
ABCF	3	3	3	3
ABCG	15	12	12	12
ABCH	3	3	3	2
Total	70	54	54	53

The number of putative ABC transporter genes in each ABC transporter family in DBM was estimated using two sets of nucleotide-binding domain (Pfam ID: PF00005) sequences (DS1 and DS2). UBH based classification was performed for DS1 (DS1-UBH) and DS2 (DS2-UBH), respectively. Phylogenetic tree-based classification was performed for DS2 (DS2-PTB). The number of ABC transporter genes in Bombyx mori was obtained from [65].

ISSN: 1471-2164