Genome-wide identification of binding sites for NAC and YABBY transcription factors and co-regulated genes during soybean seedling development by ChIP-Seq and RNA-Seq

Table 3 Summary of ChIP-Seq reads from four different libraries matched to the soybean genome

TF Name	Condition	Raw reads	Genome matched reads
NAC TF	Control	21548771	12017023
	Antibody treated	34605365	16780531
YABBY TF	Control	95047026	35218772
	Antibody treated	86685886	36005776

Sequencing of ChIP-Seq libraries produces raw read counts which were aligned to the soybean genome using ultrafast Bowtie aligner to get the number of genome matched reads. The experiment was conducted in two conditions, control library or antibody treated library.

ISSN: 1471-2164