From: Deep brain stimulation modulates nonsense-mediated RNA decay in Parkinson’s patients leukocytes
Type | Category | Term | Count | % | p-value |
---|---|---|---|---|---|
PD | SP_PIR_KEYWORDS | cytoplasm | 72 | 2.875 | 0.000 |
GOTERM_CC_FAT | GO:0043232 ~ intracellular non-membrane-bounded organelle | 57 | 2.205 | 0.000 | |
SP_PIR_KEYWORDS | phosphoprotein | 128 | 4.952 | 0.000 | |
GOTERM_CC_FAT | GO:0005819 ~ spindle | 11 | 0.426 | 0.000 | |
SP_PIR_KEYWORDS | alternative splicing | 129 | 4.990 | 0.000 | |
UP_SEQ_FEATURE | splice variant | 129 | 4.990 | 0.000 | |
GOTERM_CC_FAT | GO:0015630 ~ microtubule cytoskeleton | 20 | 0.774 | 0.000 | |
GOTERM_CC_FAT | GO:0005856 ~ cytoskeleton | 35 | 1.354 | 0.000 | |
GOTERM_CC_FAT | GO:0044430 ~ cytoskeletal part | 26 | 1.006 | 0.000 | |
GOTERM_CC_FAT | GO:0031974 ~ membrane-enclosed lumen | 40 | 1.547 | 0.001 | |
GOTERM_BP_FAT | GO:0033554 ~ cellular response to stress | 19 | 0.735 | 0.001 | |
SP_PIR_KEYWORDS | cytoskeleton | 20 | 0.774 | 0.001 | |
SP_PIR_KEYWORDS | atp-binding | 31 | 1.199 | 0.002 | |
GOTERM_MF_FAT | GO:0004674 ~ protein serine/threonine kinase activity | 15 | 0.580 | 0.003 | |
GOTERM_BP_FAT | GO:0006259 ~ DNA metabolic process | 16 | 0.619 | 0.003 | |
GOTERM_CC_FAT | GO:0070013 ~ intracellular organelle lumen | 36 | 1.393 | 0.003 | |
GOTERM_BP_FAT | GO:0032092 ~ positive regulation of protein binding | 3 | 0.116 | 0.004 | |
GOTERM_CC_FAT | GO:0005815 ~ microtubule organizing center | 10 | 0.387 | 0.004 | |
GOTERM_MF_FAT | GO:0000166 ~ nucleotide binding | 46 | 1.779 | 0.005 | |
GOTERM_CC_FAT | GO: 0005694 ~ chromosome | 14 | 0.542 | 0.005 | |
GOTERM_CC_FAT | GO:0043233 ~ organelle lumen | 36 | 1.393 | 0.005 | |
SP_PIR_KEYWORDS | acetylation | 50 | 1.934 | 0.005 | |
GOTERM_CC_FAT | GO:0070161 ~ anchoring junction | 8 | 0.309 | 0.006 | |
GOTERM_MF_FAT | GO:0005524 ~ ATP binding | 33 | 1.277 | 0.006 | |
SP_PIR_KEYWORDS | nucleotide-binding | 35 | 1.354 | 0.006 | |
GOTERM_CC_FAT | GO:0005813 ~ centrosome | 9 | 0.348 | 0.007 | |
GOTERM_MF_FAT | GO:0032559 ~ adenyl ribonucleotide binding | 33 | 1.277 | 0.008 | |
SP_PIR_KEYWORDS | transferase | 30 | 1.161 | 0.008 | |
GOTERM_BP_FAT | GO:0030099 ~ myeloid cell differentiation | 6 | 2.232 | 0.008 | |
GOTERM_BP_FAT | GO:0009057 ~ macromolecule catabolic process | 20 | 0.774 | 0.008 | |
GOTERM_CC_FAT | GO:0019898 ~ extrinsic to membrane | 14 | 0.542 | 0.009 | |
GOTERM_MF_FAT | GO:0030554 ~ adenyl nucleotide binding | 34 | 1.315 | 0.009 | |
DBS | UP_SEQ_FEATURE | FEATURE splice variant | 115 | 53.488 | 0.000 |
SP_PIR_KEYWORDS | phosphoprotein | 112 | 52.093 | 0.000 | |
SP_PIR_KEYWORDS | alternative splicing | 114 | 53.023 | 0.000 | |
UP_SEQ_FEATURE | domain:EH 1 | 3 | 1.395 | 0.002 | |
UP_SEQ_FEATURE | domain:EH 2 | 3 | 1.395 | 0.002 | |
GOTERM_CC_FAT | GO:0005829 ~ cytosol | 25 | 11.628 | 0.007 | |
OFF | SP_PIR_KEYWORDS | alternative splicing | 63 | 55.263 | 0.000 |
UP_SEQ_FEATURE | splice variant | 61 | 53.509 | 0.001 |