ECA | Number of CNV regions detected CGH analysis, Doan et al.(n) | CNV regions detected by CNVPartition (%) | CNV regions detected by PennCNV (%) | CNV regions detected by QuantiSNP (%) |
---|---|---|---|---|
1 | 67 | 11 | 11 | 24 |
2 | 31 | 3 | 3 | 35 |
3 | 35 | 0 | 3 | 29 |
4 | 27 | 7 | 11 | 15 |
5 | 44 | 0 | 0 | 11 |
6 | 29 | 7 | 4 | 14 |
7 | 50 | 2 | 4 | 12 |
8 | 24 | 4 | 4 | 38 |
9 | 17 | 0 | 6 | 29 |
10 | 31 | 0 | 0 | 48 |
11 | 39 | 3 | 5 | 28 |
12 | 15 | 7 | 13 | 47 |
13 | 22 | 0 | 55 | 55 |
14 | 32 | 0 | 3 | 34 |
15 | 33 | 0 | 0 | 3 |
16 | 23 | 0 | 0 | 13 |
17 | 22 | 0 | 5 | 14 |
18 | 27 | 0 | 0 | 19 |
19 | 14 | 0 | 0 | 0 |
20 | 47 | 4 | 9 | 17 |
21 | 18 | 0 | 0 | 33 |
22 | 21 | 0 | 0 | 29 |
23 | 17 | 6 | 6 | 24 |
24 | 10 | 0 | 0 | 0 |
25 | 14 | 29 | 29 | 43 |
26 | 4 | 0 | 0 | 0 |
27 | 7 | 0 | 57 | 86 |
28 | 5 | 0 | 100 | 80 |
29 | 6 | 17 | 0 | 17 |
30 | 14 | 0 | 0 | 50 |
31 | 9 | 0 | 0 | 0 |
total | 754 | 3 | 7 | 25 |