Table 2 Validation of the candidate deletions
From: Identification of medium-sized genomic deletions with low coverage, mate-paired restricted tags
ditagID1 | Deletion breakpoints | DelSize (bp) | Notes | Gene involved | DGV overlap2 |
|---|---|---|---|---|---|
1_67822_2/1_67825_1 | chr1:147489387-147489688 | 302 | Heterozygote | Intergenic | Novel |
1_110491_2/1_110494_1 | chr1:232385269-232386371 | 1103 | Homozygote | SLC35F3 | Variation_109897 |
1_110644_2/1_110647_1 | chr1:232653827-232654136 | 310 | Heterozygote | TARBP1 | Novel |
5_79470_2/5_79473_1 | chr5:172632846-172633171 | 326 | Homozygote | Intergenic | Variation_46815 |
7_50712_2/7_50719_1 | chr7:96313845-96319938 | 6094 | Homozygote | Intergenic | Variation_23855 |
7_83664_2/7_83673_1 | chr7:158193509-158197522 | 4014 | Heterozygote | Intergenic | Variation_43560 |
8_33206_2/8_33210_1 | chr8:64316994-64318575 | 1582 | Homozygote | Intergenic | Novel |
9_54312_2/9_54319_1 | chr9:129221441-129225898 | 4458 | Homozygote | ZNF79 | Variation_106098 |
11_33186_2/11_33189_1 | chr11:67939676-67939985 | 310 | Homozygote | LRP5 | Novel |
12_1219_2/12_1222_1 | chr12:1734274-1734588 | 315 | Heterozygote | ADIPOR2 | Variation_11592 |
12_63591_2/12_63594_1 | chr12:123274954-123275072 | 118 | Heterozygote | Intergenic | Variation_11646 |
14_29251_2/14_29254_1 | Not Validated | 0 | DPV3 | - | - |
17_141_2/17_145_1 | chr17:193768-197057 | 3290 | Homozygote | RPH3AL | Variation_25792 |
17_6977_2/17_6981_1 | chr17:8187338-8188694 | 1357 | Homozygote | ODF4 | Variation_43957 |
17_47495_2/17_47501_1 | chr17:71873831-71876905 | 3075 | Heterozygote | Intergenic | Variation_77728 |
19_22244_2/19_22248_1 | chr19:34642031-34648013 | 5983 | Homozygote | Intergenic | Variation_43984 |
22_10635_2/22_10639_1 | chr22:30106417-30110625 | 4209 | Homozygote | Intergenic | Variation_43568 |
X_7293_2/X_7300_1 | chrX:11635278-11641324 | 6047 | Homozygote | Intergenic | Variation_22612 |
X_21618_2/X_21622_1 | chrX:39977151-39979777 | 2627 | Homozygote | Intergenic | Novel |