Table 2 Summary of cDNA sequencing results
From: The root transcriptome for North American ginseng assembled and profiled across seasonal development
| Â | Stage 1 | Stage 2 | Stage 3 | Stage 4 | Stage 5 | Stage 6 | Stage 7 |
|---|---|---|---|---|---|---|---|
No. raw reads | 748,332 | 610,853 | 712,270 | 672,867 | 721,897 | 756,630 | 625,784 |
Raw nt (Mb) | 390.6 | 327.8 | 372.2 | 361 | 368.4 | 388.2 | 327.2 |
Raw avg. length (bp) | 522 | 537 | 728 | 537 | 510 | 513 | 523 |
No. filtered reads | 159,812 | 173,693 | 132,038 | 149,483 | 191,274 | 173,273 | 242,359 |
Filtered nt (Mb) | 52.6 | 63.9 | 44.1 | 52.7 | 65.3 | 59.0 | 90.5 |
Filt. avg. length (bp) | 329 | 368 | 334 | 353 | 341 | 340 | 373 |
% in assembly | 58.5 | 62.6 | 62.3 | 64.2 | 60.1 | 62.0 | 61.2 |