From: Comparison of RefSeq protein-coding regions in human and vertebrate genomes
Tax ID | Organism | Annotation release date | Genes in ortholog dataset | Annotated protein-coding genes | % Pipeline prediction | EST count | Assembly accession | Contig N50 | Scaffold N50 |
---|---|---|---|---|---|---|---|---|---|
7955 | *zebrafish | 3/24/2011 | 5481 | 26329 | 48 | 1,481,937 | GCF_000002035.4 | 1,073,451 | 1,551,602 |
8128 | nile tilapia | 9/30/2011 | 5898 | 22130 | 100 | 120,196 | GCF_000188235.1 | 29,493 | 2,802,423 |
8364 | western clawed frog | 7/29/2010 | 9611 | 21989 | 62 | 1,271,375 | GCF_000004195.1 | 17,038 | 1,567,461 |
9031 | *chicken | 12/16/2011 | 11170 | 16725 | 71 | 600,433 | GCF_000002315.3 | 279,750 | 12,877,381 |
9103 | turkey | 3/25/2011 | 8981 | 12129 | 100 | 17,435 | GCF_000146605.1 | 12,520 | 857,645 |
9258 | platypus | 9/3/2011 | 6917 | 16477 | 99 | 9,699 | GCF_000002275.2 | 11,554 | 958,970 |
9305 | tasmanian devil | 7/16/2012 | 12456 | 19365 | 100 | 0 | GCF_000189315.1 | 20,139 | 1,847,106 |
9483 | white-tufted-ear marmoset | 6/8/2012 | 15191 | 19408 | 100 | 2,605 | GCF_000004665.1 | 29,293 | 5,167,444 |
9544 | rhesus macaque | 6/2/2010 | 15228 | 22541 | 97 | 58,412 | GCF_000002255.3 | 25,707 | 6,094,595 |
9555 | olive baboon | 9/5/2012 | 15583 | 21785 | 98 | 145,582 | GCF_000264685.1 | 40,262 | 528,927 |
9593 | western gorilla | 12/6/2012 | 16250 | 22059 | 100 | 0 | GCF_000151905.1 | 11,661 | 913,458 |
9597 | pygmy chimpanzee | 7/25/2012 | 16519 | 20463 | 100 | 0 | GCF_000258655.1 | 66,775 | 10,124,892 |
9598 | chimpanzee | 10/27/2012 | 16997 | 21396 | 96 | 17,130 | GCF_000001515.5 | 50,679 | 8,925,874 |
9601 | sumatran orangutan | 7/18/2012 | 14981 | 22822 | 86 | 46,981 | GCF_000001545.4 | 15,648 | 747,460 |
9606 | *human | 10/30/2012 | 18421 | 19527 | 2 | 8,699,560 | GCF_000001405.22 | 38,508,932 | 44,983,201 |
9615 | *dog | 2/2/2011 | 15784 | 19163 | 93 | 382,638 | GCF_000002285.3 | 267,478 | 45,876,610 |
9646 | giant panda | 7/30/2010 | 14466 | 17892 | 100 | 0 | GCF_000004335.1 | 39,886 | 1,281,781 |
9685 | domestic cat | 11/7/2012 | 15864 | 18201 | 98 | 919 | GCF_000181335.1 | 20,621 | 4,658,941 |
9785 | *african savanna elephant | 8/25/2011 | 14259 | 18389 | 100 | 0 | GCF_000001905.1 | 69,023 | 46,401,353 |
9796 | *horse | 6/28/2011 | 14668 | 18002 | 96 | 37,199 | GCF_000002305.2 | 112,381 | 46,749,900 |
9823 | pig | 10/11/2011 | 12283 | 21992 | 84 | 1,624,129 | GCF_000003025.5 | 69,669 | 576,008 |
9913 | *Bos taurus (bovine) | 12/2/2011 | 16013 | 21157 | 39 | 1,559,494 | GCF_000003055.4 | 96,955 | 6,380,747 |
9940 | sheep | 12/2/2012 | 15588 | 19097 | 96 | 338,483 | GCF_000298735.1 | 40,376 | 100,079,507 |
9986 | rabbit | 4/23/2010 | 9032 | 16117 | 94 | 34,938 | GCF_000003625.2 | 64,648 | 35,972,871 |
10029 | chinese hamster | 10/17/2011 | 13835 | 19702 | 99 | 0 | GCF_000223135.1 | 39,361 | 1,147,233 |
10090 | *house mouse | 10/1/2012 | 16142 | 21780 | 6 | 4,853,5*8 | GCF_000001635.21 | 32,273,079 | 52,589,046 |
10116 | *norway rat | 6/20/2012 | 15718 | 22719 | 29 | 1,103,577 | GCF_000001895.4 | 59,469 | 2,178,346 |
10141 | *domestic guinea pig | 10/3/2011 | 14436 | 18029 | 98 | 19,975 | GCF_000151735.1 | 80,583 | 27,942,054 |
13616 | gray short-tailed opossum | 5/31/2011 | 12942 | 17924 | 98 | 265 | GCF_000002295.2 | 108,014 | 59,809,810 |
27679 | *bolivian squirrel monkey | 9/9/2012 | 16089 | 19331 | 100 | 0 | GCF_000235385.1 | 38,823 | 18,744,880 |
28377 | *green anole | 3/30/2011 | 10041 | 15645 | 100 | 156,802 | GCF_000090745.1 | 79,867 | 4,033,265 |
30611 | small-eared galago | 7/18/2012 | 15596 | 19454 | 100 | 0 | GCF_000181295.1 | 27,100 | 13,852,661 |
31033 | torafugu | 11/6/2012 | 5560 | 18592 | 98 | 0 | GCF_000180615.1 | 52,883 | 928,938 |
61853 | northern white-cheeked gibbon | 5/6/2011 | 15209 | 19556 | 100 | 0 | GCF_000146795.1 | 35,148 | 22,692,035 |