Table 1 Candidate sequence analysis
From: Fungal genomes mining to discover novel sterol esterases and lipases as catalysts
Selected candidates (putative protein JGI accession number) | Fungal species | CDS length | Homology against NCBI | Homology against LED | % of similitude with Lip3 |
|---|---|---|---|---|---|
jgi|Neudi1|100745| | Neurospora discreta | 1737 nt | 75% with Q2MDG4 | 75%with Q2MDG4 | 42% |
jgi|Necha2|30050| | Nectria haematococca | 1764 nt | 64% with Q2MDG4 | 62% with Q2MDG4 | 39% |
jgi|Trire2|78828| | Trichoderma reesei | 1713 nt | 59% with Q2MDG4 | 59%with Q2MDG4 | 40% |
jgi|Aspni5|50770| | Aspergillus niger | 1689 nt | 64% with Q5XTQ4 | 57% with Q5XTQ4 | 40% |
jgi|Pyrtr1|155673| | Pyrenophora tritici-repentis | 1683 nt | 62% with Q5XTQ4 | 62% with Q5XTQ4 | 46% |
jgi|Altbr1|164|AB00164 | Alternaria brassicicola | 1686 nt | 64% with Q5XTQ4 | 61% with Q5XTQ4 | 44% |