Table 3 Selected genes with altered expression during calyx abscission process

Photosynthesis

Pbr041327.1

Photosystem I subunit V

62.76

208.63

58.71

123.22

106.36

69.55

42.42

Pbr001999.2

Photosystem I PsaA/PsaB

1.48

1.74

5.07

12.53

4.54

30.45

20.26

Pbr020992.1

Photosystem I PsaA/PsaB

0.62

0.80

2.82

6.942

3.08

16.94

10.13

Pbr031897.1

F-type H + -transporting ATPase subunit gamma

17.17

49.15

12.11

41.26

32.20

17.06

16.84

Pbr032910.1

Photosystem II 13 kDa protein

14.46

30.59

4.37

15.52

15.82

10.07

8.23

Hormone/signaling

Pbr031954.1

ACC oxidase 7

9.27

14.43

71.38

86.68

17.61

7.23

7.72

Pbr002199.1

Ethylene receptor

55.97

114.60

40.13

30.56

117.91

36.02

28.87

Pbr023072.1

Ethylene receptor

43.61

131.70

63.22

32.01

91.77

43.13

33.68

Pbr036692.1

ACC synthase

38.30

18.83

11.12

15.04

29.58

3.91

4.05

Pbr000435.1

Ethylene-responsive transcription factor

14.83

4.41

3.24

8.20

9.78

2.37

4.18

Pbr025988.1

Ethylene-responsive transcription factor

0.62

0

0

0.58

1.79

0

0

Pbr030542.1

Ethylene-responsive transcription factor 1B

4.82

2.27

2.11

35.67

12.25

2.84

4.94

Pbr021608.1

PtrAUX6; auxin influx carrier component

1.73

6.41

2.25

10.32

29.44

5.33

1.77

Pbr013424.1

PIN6; auxin efflux carrier component

111.57

52.76

32.52

89.18

27.93

6.28

19.50

Cell wall modification

Pbr036382.1

Polygalacturonase

17.67

1.60

0.28

25.84

2.06

0.47

0.13

Pbr014899.1

Pectinesterase

7.17

2.27

1.27

0

0

0

0.25

Pbr014900.1

Pectinesterase

6.18

2.54

1.41

0

0.28

0.12

0

Pbr033313.1

Beta-expansin 1a

163.83

69.86

189.37

93.14

147.49

139.93

167.78

Pbr035305.1

Pectate lyase

3.34

5.74

2.11

5.01

20.78

1.54

1.52

Pbr022719.1

Pectinesterase-2

9.02

2.14

0.28

2.41

1.65

0

0

Pbr011421.1

Alpha-expansin 15

7.66

3.21

0.85

3.95

6.88

2.13

2.41

Pbr005280.1

Pectate lyase

5.81

0.94

1.55

17.55

9.50

1.54

0.63

Pbr039133.1

Pectate lyase

10.39

4.01

1.83

0.29

0.28

0.24

0.38

Pbr000187.1

Xyloglucan endotransglucosylase/hydrolase

1.48

2.81

1.27

2.12

5.09

0.24

0.25

Pbr042842.1

Xyloglucan endotransglucosylase/hydrolase

6.18

6.28

2.53

4.34

11.01

1.30

0.89

Pbr040203.1

xyloglucan endotransglycosylase

6.18

5.61

3.66

3.76

4.95

1.42

1.14

Transcription factors

Pbr029902.1

AP2 domain-containing transcription factor

0.49

2.54

1.41

3.18

10.59

2.61

0.89

Pbr022669.1

MYB 12 transcription factor

1.24

1.74

0.28

1.83

4.27

1.42

1.14

Pbr002230.1

WRKY transcription factor

36.82

6.55

0.42

11.96

6.33

0.47

36.82

Pbr036688.1

WRKY transcription factor

38.18

6.81

0.42

12.44

6.47

0.47

38.18

Pbr010864.1

SCL domain class transcription factor

873.50

401.50

374.51

173.06

78.7

144.67

210.83

Carbohydrate biosynthesis and metabolism

Pbr003011.1

Alpha-amylase

293.80

76.67

33.09

255.11

32.06

24.88

25.96

Pbr008092.1

Sugar transporter

225.35

58.90

299.04

149.06

74.02

104.74

167.15

Pbr013916.1

Sorbitol dehydrogenase,

25.45

19.23

61.67

45.99

20.09

44.31

73.07

Pbr032770.1

Sorbitol dehydrogenase

1.73

0.80

0.28

1.64

0.55

0.12

0.63

Pbr013912.1

Sorbitol dehydrogenase

9.88

13.49

14.50

60.07

42.93

28.91

15.96

Pbr013913.1

Sorbitol dehydrogenase

177.79

73.46

73.92

187.82

174.87

59.48

110.42

Pbr001279.1

UDP-glucosyltransferase|

57.95

22.17

30.13

14.46

17.20

6.87

11.14

Pbr019918.1

Glycosyl Hydrolase

51.03

4.01

5.91

8.58

8.67

2.73

2.15

Pbr001745.1

Sucrose phosphate syntase

1.73

4.274

6.476

1.928

6.742

2.133

1.773

Pbr008035.1

Sucrose phosphate syntase

2.842

7.88

10.7

4.435

11.97

3.555

3.546

Pbr014962.1

Glycosyltransferase QUASIMODO1

45.34

67.32

20.98

35.87

76.09

33.41

21.78

Pbr033075.1

Glycosyltransferase QUASIMODO1

61.28

88.15

26.19

44.54

100.58

38.51

22.03

Pbr036396.1

Glucose-1-phosphate adenylyltransferase

49.54

42.47

23.37

43.10

54.35

24.17

26.34

Pbr005718.1

Beta-fructofuranosidase

10.13

3.47

0.70

0.39

0.69

0

0.89

Other differentially regulated genes

Pbr009422.1

Probable E3 ubiquitin-protein ligase

8.15

1.74

27.60

0.87

9.22

2.01

2.91

Pbr039793.1

Acyltransferase

45.01

11.62

17.60

7.91

20.64

3.32

4.31

Pbr032411.1

Cysteine-rich receptor-like protein kinase

28.91

7.88

9.86

28.06

4.13

0.59

1.14

Pbr013236.1

Protein IDA

60.88

13.89

9.29

32.01

3.16

0

0.38

Pbr012802.1

Predicted protein

5.19

2.00

7.88

2.41

4.27

1.19

1.52

Pbr012908.1

Predicted protein

4.20

1.34

7.74

2.41

11.56

2.84

1.01

Pbr042050.1

Predicted protein

194.34

41.00

13.37

143.47

5.78

0.83

1.52

Pbr020727.1

Unknown

546.95

188.06

250.61

93.23

87.78

245.15

177.53