Figure 2

Evaluation of three computational programs on prediction of prokaryotic and algal genes in M. brevicollis . ÉFor AlienG, the alien index threshold was set to 1.2. For PhyloGenie, bootstrap value threshold for interested branches was set to 50%. Prediction results from three programs are shown in three different colors. The percentages in white ovals indicate positive rates (before hyphen) and false negative rates (after hyphen). The percentage in colored background indicates the positive rate for each part and is shown above. The numbers of foreign genes identified by manual curation (before slash) and originally predicted (after slash) are shown below.