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Table 5 Orthologs of Xcv 85–10 flagellar genes in genomes of xanthomonads

From: Genome sequence of Xanthomonas fuscans subsp. fuscansstrain 4834-R reveals that flagellar motility is not a general feature of xanthomonads

Xcv85-10

XalGPE PC73

Xac306

XacmF1

Xff4834R

XccATCC 33913

XcmNCPPB 4381

Xcr756c

XfaICPB10535

XgATCC19865

XooBLS256

XooPXO99a

XvATCC35937

X. translucensD61454

X. translucenspv.translucensDSM 18974

X. translucenspv.graminisART-Xtg29

Gene

Product

               

XCV1977

RNA polymerase sigma factor for flagellar operon FliA

1

1

1

1

1

1

1

1

1*

1

1

1

1

1

0

XCV1978

flagellar synthesis regulator FleN

1

1

1

1

1

1*

1

1

1

1

1

1

1

1

0

XCV1979

flagellar biosynthesis regulator FlhF

1*

1

1

1

1

1

1

0

1*

1

1

1*

1

1*

0

XCV1980

flagellar biosynthesis protein FlhA

1

1

1

1

1

1

1

1

1

1

1

1

1

1

0

XCV1981

flagellar biosynthesis protein FlhB

1*

1

1

1

1

1

1

1

1

1

1

1

1

1

0

XCV1982

sensor protein

0

1

1

1*

1

1*

1

1

1

1

1

0

0

0

0

XCV1983

sensor protein

0

1

1

1

1

0

1

1

1

1

1

1

1*

0

0

XCV1984

hypothetical protein XCV1984

0

0

1

0

0

0

0

0

0

0

0

0

0

0

0

XCV1985

sensor protein

0

1

1

0

1*

1

1*

1

1*

1*

1*

1

1*

1*

0

XCV1986

flagellar biosynthesis pathway component FliR

1*

1

1

1

1

1

1

1

1

1

1

1

1

1

0

XCV1987

flagellar biosynthesis pathway component FliQ

1

1

1

1

1

1

1

0

1

1

1

1

1

1

0

XCV1988

flagellar biosynthesis protein FliP

1

1

1

1

1

1

1

1

1

1

1

1

1

1

0

XCV1989

flagellar biogenesis protein FliO

1*

1

1

1

1

1

1

0

1

1

1

1

1

1

0

XCV1990

flagellar motor switch/type III secretory pathway protein FliN

1

1

1

1

1

1

1

1

1

1

1

1

1

1

0

XCV1991

flagellar motor switch protein FliM

1

1

1

1

1

1

1

1

1

1

1

1

1

1

0

XCV1992

flagellar basal body-associated protein FliL

1*

1

1

1

1

1

1

1

1

1

1

1

1

1

0

XCV1993

flagellar hook-length control protein FliK

1*

1

0

1

1

1*

1*

1*

1

1

1

1*

1*

1*

0

XCV1994

flagellar biosynthesis chaperone FliJ

1

1

1

1

1

1

1

1

1

1

1

1

1

1

0

XCV1995

flagellar biosynthesis/type III secretory pathway ATPase FliI

1

1

1

1

1

1

1

1

1

1

1

1

1

1

0

XCV1996

flagellar biosynthesis/type III secretory pathway protein FliH

1*

1

1

1

1

1*

1

1

1

1

1

1

1

1

0

XCV1997

flagellar motor switch protein FliG

1

1

1

1

1

1

1

1

1

1

1

1

1

1

0

XCV1998

flagellar MS-ring protein

1*

1

1

1

1

1*

1

1

1

1

1

1

1

1

0

XCV1999

flagellar hook-basal body complex protein FliE

1*

1

1

1

1

1

1

1

1

1

1

1

1

1

0

XCV2000

glycosyltransferase

1*

1

1

1

1*

1*

1

1

1

1

1

1

1*

0

0

XCV2001

hypothetical protein XCV2001

0

0

0

0

0

0

0

0

0

0

0

0

0

0

0

XCV2002

hypothetical protein XCV2002

0

0

1

0

0

0

1

0

1

0

0

0

0

0

0

XCV2003

3-deoxy-manno-octulosonate cytidylyltransferase

1*

0

1

0

0

0

1

0

1

0

0

0

0

0

0

XCV2004

hypothetical protein XCV2004

0

0

1

0

0

0

1

0

1

0

0

0

0

0

0

XCV2005

hypothetical protein XCV2005

0

1*

1

0

0

0

1*

1*

1*

0

1*

1*

0

1*

0

XCV2006

hypothetical protein XCV2006

1*

1*

1

0

0

1*

1*

1*

1*

1*

1*

1*

1*

1*

0

XCV2007

Rieske 2Fe-2S family protein

1*

1*

1

0

0

1*

1*

1*

1*

1*

1*

1*

1*

1*

0

XCV2008

acetyltransferase

1*

1*

1

0

0

1*

1*

1*

1*

1*

1*

1

1*

1*

0

XCV2009

short chain dehydrogenase

1*

1*

1

0

0

1*

1*

1*

1*

1

1*

1

1*

0

0

XCV2010

short chain dehydrogenase

1

1*

1

0

0

1*

1*

1*

1*

1

1*

1

1*

1*

0

XCV2011

3-oxoacyl-ACP synthase

1

1

1

0

0

1

1*

1

1

1

1

1

1

0

0

XCV2012

acyl carrier protein

1

1

1

0

0

1

1

0

1

1

1

1

1

1

0

XCV2013

aminotransferase

1

1

1

0

1*

1

1

1

1

1

1

1

1

0

0

XCV2014

flagellar sigma-54 dependent transcriptional activator FleQ

1

1

1

0

1

1

1

1

1

1

1

1

1

1

0

XCV2015

two-component response regulator

1

1

1

0

1

1

1

1

1

1

1

1

1

0

0

XCV2016

RNA polymerase sigma-54 factor

1

1

1

0

1

1

1

1

1

1

1

1

1

1

0

XCV2017

LuxR family two-component response regulator

1

1

1

0

1

1

1

1

1

1

1

 

1

1

0

XCV2018

hypothetical protein XCV2018

0

1

1

0

0

1

1

1

1

1

1

0

0

1*

0

XCV2019

hypothetical protein XCV2019

0

1

1

0

0

1

1

0

1

1

1

0

0

1*

0

XCV2020

flagellin-specific chaperone FliS

1*

1

1

0

1

1

1

1

1

1

1

0

1

1

0

XCV2021

flagellar capping protein

1*

1

1

0

1

1

1

1

1

1

1

1*

1

1*

0

XCV2022

flagellin

1*

1

1

0

1

1

1

1

1

1

1

1

1

1

0

XCV2023

flagellar hook-associated protein FlgL

1*

1

1

0

1

1

1

1

1

1

1

1

1

1

0

XCV2024

flagellar hook-associated protein FlgK

1*

1

1

0

1

1*

1

1

1

1

1

1

1

1*

0

XCV2025

flagellar rod assembly protein/muramidase FlgJ

1*

1

1

0

1

1

1

1

1

1

1

1

1

1

0

XCV2026

flagellar basal body P-ring protein

1

1

1

0

1

1

1

1

1

1

1

1

1

1

0

XCV2027

flagellar basal body L-ring protein

1

1

1

0

1

1

1

1

1

1

1

1

1

0

0

XCV2028

flagellar basal body rod protein FlgG

1

1

1

0

1

1

1

1

1

1

1

1

1

1

0

XCV2029

flagellar basal body rod protein FlgF

1*

1

1

0

1

1*

1

1

1

1

1

1

1

0

0

XCV2030

flagellar hook protein FlgE

1*

1

1

0

1

1*

1

1

1

1

1

1

1

1

0

XCV2031

flagellar basal body rod modification protein

1*

1

1

0

1

1

1

1

1

1

1

1

1

0

0

XCV2032

flagellar basal body rod protein FlgC

1

1

1

0

1

1

1

1

1

1

1

1

1

1

0

XCV2033

flagellar basal-body rod protein FlgB

1

1

1

0

1

1

1

1

1

1

1

1

1

0

0

XCV2034

chemotaxis signal transduction protein

1

1

1

0

1

1

1

1

1

1

1

1

1

1

0

XCV2035

flagellar basal body P-ring biosynthesis protein FlgA

1

1

1

1

1

1

1

1

1

1

1

1

1

0

0

XCV2036

negative regulator of flagellin synthesis

1*

1

1

1

1

1

1

1

1

1

1

1

1

1

0

XCV2037

hypothetical protein XCV2037

1*

1

1

1

1

1

1

1

1

1

1

1

1

0

0

  1. CDS are considered as orthologs (1) on the basis of an identity of more than 80% on more than 80% of the length of the CDS. CDS are considered as putative orthologs (1*) when homology is lower or on a shorter length of the CDS and if the expected functional domains are identified. On other cases, no orthologs are recorded (0).
  2. a X. translucens D61454.
  3. b X. translucens pv. translucens DSM 18974.
  4. c X. translucens pv. graminis ART-Xtg29.
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