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Table 2 Enrichment of unigenes in MapMan terms for 12,272 duplicated Yukon unigenes

From: Transcriptome sequencing and microarray design for functional genomics in the extremophile Arabidopsis relative Thellungiella salsuginea (Eutrema salsugineum)

Mapman bin code

Mapman term

Number of duplicated Yukon unigenes

Fisher’s exact test P-value (Bonferroni-corrected)*

29.2.1

protein.synthesis.ribosomal protein

558

1.48E-18

11.1

lipid metabolism – Fatty Acid synthesis and Fatty Acid elongation

89

1.56E-06

29.5

protein.degradation

652

3.28E-05

34

transport

433

1.25E-04

30

signalling

488

2.93E-04

1.1.1.01

PS.lightreaction.photosystem II.LHC-II

52

3.98E-04

20.1.7

stress.biotic.PR-proteins

29

1.00E-03

20.1

stress.biotic

93

1.86E-03

29.3.4

protein.targeting.secretory pathway

95

3.52E-03

1.1.2.01

PS.lightreaction.photosystem I.LHC-I

41

4.32E-03

23.4.010

nucleotide metabolism.phosphotransfer and pyrophosphatases.nucleoside diphosphate kinase

21

8.96E-03

20.2.3

stress.abiotic.drought/salt

63

1.17E-02

30.3

signalling.calcium

129

1.20E-02

21

redox.regulation

167

2.28E-02

11.1.012

lipid metabolism.FA synthesis and FA elongation.ACP proteins

18

2.49E-02

17.6.3

hormone metabolism.gibberelin.induced-regulated-responsive-activated

18

2.49E-02

27.3.25

RNA.regulation of transcription.MYB domain transcription factor family

14

2.54E-02

27.3.52

RNA.regulation of transcription.Global transcription factor group

16

2.70E-02

29.1

protein.aa activation

59

2.72E-02

4.02

glycolysis.PGM

10

3.22E-02

  1. *The Bonferroni-corrected Fisher’s exact test P-value that was extracted from MapMan term enrichment analysis using MEFISTO software [101].