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Figure 2 | BMC Genomics

Figure 2

From: Identification and characterization of EBV genomes in spontaneously immortalized human peripheral blood B lymphocytes by NGS technology

Figure 2

Pair-wise alignment of genomic sequences for the newly assembled K4413-Mi EBV, K4123-Mi EBV, NA12878 EBV, and other 7 EBV strains previously reported to GenBank with the WT-EBV genome. The 10 EBV genomes examined generally have high sequence identity with WT-EBV, except repeat regions (brown) and polymorphic genes (purple). EBNA3A, -3B, and -3C genes show lower sequence identity in AG876 (type 2). The region marked with yellow colour in the NA12878 EBV genome has a significantly lower coverage than the rest of NA12878 EBV genome in genome assembly. The figure was generated by mVISTA software, using 100-bp moving window with minimum identity of 50% and maximum identity of 100%.

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BMC Genomics

ISSN: 1471-2164

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