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Figure 3 | BMC Genomics

Figure 3

From: A comparative hidden Markov model analysis pipeline identifies proteins characteristic of cereal-infecting fungi

Figure 3

HMM search returns ToxA-like proteins in Cochliobolus heterostrophus isolates C4 and C5. A phmmer search with SnToxA (SNOG_16571) returns sequence similarity hits to Pyrenophora tritici-repentis (PTRG_04889) and hits to potential ToxA-like domains in two proteins in Cochliobolus heterostrophus isolates C4 and C5. The corresponding multiple alignment of the phmmer domain hits is visualized by Jalview [39].

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BMC Genomics

ISSN: 1471-2164

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