From: A BAC based physical map and genome survey of the rice false smut fungus Villosiclava virens
Cutoff | Contigs | Avr contig length (kb)1 | Longest contig (kb)1 | Physical length (Mb)1 | Q contigs/ Q clones (%)2 | No. contigs containing different clone numbers | Singletons (%)3 | ||||
---|---|---|---|---|---|---|---|---|---|---|---|
>50 | 50-26 | 25-10 | 9-3 | =2 | |||||||
10-30 | 314 | 184 | 287 | 58.2 | 0/0 (0.00) | 0 | 0 | 18 | 180 | 116 | 991 (43.3) |
10-25 | 305 | 196 | 376 | 60.0 | 7/7 (0.31) | 0 | 0 | 43 | 168 | 94 | 653 (28.5) |
10-20 | 255 | 217 | 774 | 55.5 | 36/49 (2.14) | 0 | 4 | 57 | 136 | 58 | 428 (18.7) |
10-18 | 231 | 230 | 774 | 53.4 | 41/63 (2.75) | 0 | 9 | 61 | 112 | 49 | 357 (15.6) |
10-15 | 196 | 261 | 774 | 51.3 | 63/111 (4.85) | 1 | 15 | 61 | 78 | 41 | 255 (11.1) |
10-12 | 161 | 302 | 1032 | 48.7 | 74/164 (7.16) | 3 | 20 | 53 | 62 | 23 | 177 (7.7) |
10-10 | 142 | 335 | 1585 | 47.7 | 77/174 (7.60) | 5 | 20 | 51 | 48 | 18 | 160 (7.0) |
10-08 | 135 | 340 | 1585 | 46.0 | 80/204 (8.91) | 5 | 22 | 50 | 44 | 14 | 134 (5.9) |
Phase IA 4 | 194 | 263 | 774 | 51.2 | 63/111 (4.85) | 1 | 15 | 61 | 76 | 41 | 255 (11.1) |