Table 2 Porcine novel miRNAs conserved in other species (miRBase release 20.0)
Unique ID | miRNAs name | Count | Sequence | Size | Conservation | Match |
|---|---|---|---|---|---|---|
PS-1 | miR-290-5p | 14 | ACTCAAACTGTGGGGGCACTTT | 22 | mmu(#) | 1nt sub(#) |
PS-2 | miR-378c | 33 | ACTGGACTTGGAGTCAGAAGT | 21 | hsa | 4nt delete |
PS-3 | miR-20b-3p | 4 | ACTGTAGTGTGGGCACTTCCAGT | 23 | hsa | 1nt add, 1nt sub |
PS-4 | miR-219-3p | 11 | AGAATTGTGGCTGGACATCT | 20 | bta | 1nt delete |
PS-6 | miR-138-5p | 42 | AGCTGGTGTTGTGAATCAGGCCG | 23 | mmu | perfect |
PS-7 | miR-31-5p | 5 | AGGCAAGATGCTGGCATAGCT | 21 | has | perfect |
PS-9 | let-7f-1-3p | 2 | CTATACAATCTATTGCCTTCC | 21 | rno | perfect |
PS-11 | miR-874-3p | 25 | CTGCCCTGGCCCGAGGGACCGA | 22 | mmu | perfect |
PS-12 | miR-551a | 225 | GCGACCCACTCTTGGTTTCC | 20 | hsa | 1nt delete |
PS-13 | miR-138-3p | 1 | GCTACTTCACAACACCAGGGT | 21 | hsa | 1nt sub, 1delete |
PS-14 | miR-182-3p | 1 | GGTGGTTCTAGACTTGCCAACT | 22 | mmu | 1nt insert |
PS-15 | miR-5003-3p | 58 | TATTTAATAGGTTGTTGGGA | 20 | hsa | 2nt sub, 2nt delete |
PS-16 | miR-150-5p | 164 | TCTCCCAACCCTTGTACCAGT | 21 | mmu | 1nt delete |
PS-17 | miR-2411-3p | 7 | TGAACTGTCATACTCCCACATC | 22 | bta | 3nt delete, 1nt sub |
PS-18 | let-7f-5p | 20 | TGAGGTAGTAGATTGTATAGTTG | 23 | hsa | 1nt insert |
PS-19 | miR-31-3p | 3 | TGCTATGCCAACATATTGCCA | 21 | has | 1nt delete |
PS-20 | miR-182 | 46 | TTTGGCAATGGTAGAACTCACA | 22 | dre | perfect |
PS-21 | miR-96-5p | 65 | TTTGGCACTAGCACATTTTTGCT | 23 | hsa | perfect |