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Table 1 Datasets used in this study

From: Visualisation of the T cell differentiation programme by Canonical Correspondence Analysis of transcriptomes

GEO accession

Summary

Number of classes

Number of replicates

Platform

GEO accession (platform)

Citation

GSE14308

Microarray data of Th subsets (in vitro-generated Th1, Th2, Th17, and iTreg) and freshly sorted Treg and naïve T cells

6

2

Affymetrix GeneChip

GPL1261

[23]

Mouse Genome

430 2.0 Array

GSE20898

RNA-seq data of (in vitro-generated Th1, Th2, Th17, and iTreg) from Gata3-KO and WT

8

2

Illumina Genome

GPL9250

[24]

Analyzer II

GSE21670

Stat3-KO and WT T cells under various culture conditions

8

2

Affymetrix GeneChip

GPL1261

[25]

Mouse Genome

430 2.0 Array