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Table 4 GO analysis of consensus sequences used to design the HAU-SNP-prefixed markers on level 1

From: Development of EST-based SNP and InDel markers and their utilization in tetraploid cotton genetic mapping

 

Functional categories

Number of genes

Number of SNPs

SNPs/gene

HAU-SNP 1)

Cellular component

21

292

13.9

 

Molecular function

107

1001

9.36

 

Biological process

80

845

10.56

HAU-SNP 2)

Cellular component

7

43

6.14

 

Molecular function

92

594

6.46

 

Biological process

78

406

5.21

Total

Cellular component

28

335

11.96

 

Molecular function

199

1595

8.02

 

Biological process

158

1251

7.92

  1. 1)HAU-SNP001 ~ 356. 2)HAU-SNP357 ~ 811.