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Table 9 Differently-expressed proteins in the mutant (M) compared to the wild-type (WT) under water stress

From: Transcriptomic and proteomic analyses of a pale-green durum wheat mutant shows variations in photosystem components and metabolic deficiencies under drought stress

Expression

Function

Protein description

SwissProt accession number

Speciesb

Ratio WT stress/WT control

Ratio M stress/M control

Ratio M/T under water stres

Methodc

Induced

Carbohydrate metabolism

G3PX; Glyceraldehyde-3-phosphate dehydrogenase. cytosolic

P26517

1

-

-

304.7

PMF

  

G3PX; Glyceraldehyde-3-phosphate dehydrogenase. cytosolic

P26517

1

-

-

215.4

PMF

  

Glyceraldehyde-3-phosphate dehydrogenase A. chloroplastic

P09315

2

-

170.3

87.8

MS/MS

  

Fructose-bisphosphatealdolaseF2CR16

BAJ85287a

1

-

-

3.7

MS/MS

 

Amino acid metabolism

Cysteine synthase

P38076

3

-

-

252.7

MS/MS

 

Chloroplast aspartate aminotransferase

ACG59771a

3

8.7e-13

-

101.1

MS/MS

  

Putative 3-beta hydroxysteroid dehydrogenase/isomerase protein

BAJ86066a

1

-

134.5

75.8

MS/MS

 

Photosynthesis

ATPB; ATP synthase subunit beta. chloroplastic

P20858

3

-

-

114.2

PMF

  

PSBO; Oxygen-evolving enhancer protein 1. chloroplastic (PSII)

Q40459

4

-

-

2.5

PMF

  

PSBP; Oxygen-evolving enhancer protein 2. chloroplastic (PSII)

Q00434

3

-

2.1

2.1

PMF

 

Biosynthesis phytoalexins

Isoflavone reductase

B5M699

1

-

-

2.6

PMF

 

Translation

Elongation factor Tu. chloroplastic-like. predicted

XP_003575279a

5

-

2.2

2.5

MS/MS

 

Detoxification

CATA1; Catalase-1

Q43206

3

-

3.4

2.5

PMF

Repressed

Photosynthesis

Chloroplast light-harvesting chlorophyll a/b binding protein (Lhc II typeI CAB)

ADL41158a

3

0.4

0.3

0.5

MS/MS

  

Photosystem I reaction center subunit IV. chloroplastic (PSI RCsubIV)

P13194

1

-

0.5

0.4

MS/MS

  

Precursor of CP29. core chlorophyll a/b binding (CAB) protein (PSII Lhc4)

CAA44777a

1

595.9

265.5

0.4

MS/MS

  

RBS2; Ribulose bisphosphate carboxylase small chain PW9. chloroplastic

P26667

3

-

0.5

0.4

PMF

  

Chlorophyll a-b binding protein CAB 1B-21 (PSI Lhc I)

ACO06083a

3

-

-

0.3

MS/MS

  

Chlorophyll a-b binding protein 1B-21. chloroplastic (CAB 1B-21)

Q9SDM1

1

-

2.5e-13

0.002

MS/MS

 

Heme binding

HBL2; Non-symbiotic hemoglobin 2

O24521

6

-

0.5

0.5

PMF

  

C71AJ; Cytochrome P450 71A19

Q9T0K0

6

0.3

0.4

0.4

PMF

  1. aAccession number from NCBI.
  2. bSpecies: 1: Hordeum vulgare; 2: Zea mays; 3:Triticum aestivum; 4: Nicotiana tabacum; 5: Brachypodium distachyon; 6: Arabidopsis thaliana.
  3. cMethod: PMF: Peptide Mass Fingerprinting; MS/MS: MALDI TOF/TOF.
  4. Ratios are only indicated for differences statistically significant.
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BMC Genomics

ISSN: 1471-2164

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