Table 3 Bifidobacterium breve variable regions
From: Comparative genomics of the Bifidobacterium brevetaxon
Variable regions | B. breveUCC2003 | B. breveS27 | B. breve689b | B. breveNCFB 2258 | B. breveJCM 7017 | B. breveJCM 7019 | B. breve12L | B. breveACS-071-V-Sch8b |
|---|---|---|---|---|---|---|---|---|
EPS cluster 2 | Bbr_0430-0474 | BS27_0430-0465 | B689b_0425-0453 | B2258_0400-0427 | B7017_0382-0428 | B7019_0391-0428 | (B12L_0366-0393) | (HMPREF9228_0447-58) |
EPS cluster 1 | Bbr_1786-1803 | BS27_1781-1804 | B689b_1819-1843 | B2258_1811-1826 | B7017_1982-2015 | B7019_1956-1987 | B12L_1718-1745 | HMPREF9228_1868-92 |
CRISPR | Bbr_1405-1411 | BS27_1428-1434 | - | B2258_1384-1390 | B7017_1609-1615 | B7019_1592-1598 | - | HMPREF9228_1444-1451 |
R/M system 1 | Bbr_0214-0216 | BS27_0382-0383 | B689b_1504-1505 | B2258_0195-0196 | B7017_0735-0736 | B7019_0015-0016 | B12L_1341-1346 | HMPREF9228_1774-75 |
R/M system 2 | Bbr_1118-1119 | - | - | B2258_0357-0358 | B7017_1663-1664 | B7019_0077-0079 | - | - |
R/M system 3 | Bbr_1120-1121 | - | - | - | - | B7019_0197-0198 | - | - |
pil1 | Bbr_0113-0115 | BS27_0127-29 | B689b_0101-0103 | B2258_0100-0102 | B7017_0130-0132 | B7019_0110-0112 | B12L_0104-0106 | HMPREF9228_0113-15 |
pil2 | Bbr_0365-0366 | BS27_0354-55 | B689b_0357-0358 | B2258_0329-0330 | B7017_0315-0316 | B7019_0326-0327 | B12L_0301-0302 | HMPREF9228_0369-70 |
pil3 | Bbr_1887-1889 | - | - | B2258_1894-1896 | B7017_2091-2093 | - | - | - |