Table 1 List of the inferred clusters in the presence of recurrent trans-factors

RBP

AGO1, AGO2, ELAVL1, FMR1_iso1, FMR1_iso7,

FXR2, LIN28A, LIN28B, MOV10, TIA1, TIAL1,

ZC3H7B

RBP

AGO1, AGO2, ELAVL1, IGF2BP1, IGF2BP2,

IGF2BP3, TIAL1

Singleton

AGO1

RBP

ELAVL1, HNRNPD

RBP

AGO1, AGO2, ELAVL1, EWSR1, FMR1_iso1,

FUS, LIN28A, LIN28B, TAF15, TIA1, TIAL1,

ZC3H7B

RBP

AGO1, ELAVL1, TIA1, TIAL1

RBP

AGO1, FMR1_iso1, FMR1_iso7

RBP

AGO1, AGO2, CAPRIN1, ELAVL1, FMR1_iso1,

FMR1_iso7, LIN28B, TIA1, TIAL1, ZC3H7B

RBP

AGO1, AGO2, C22ORF28, ELAVL1, FMR1_iso1,

FMR1_iso7, LIN28B, TIA1, TIAL1, ZC3H7B

RBP-miRNA

LIN28A, LIN28B, hsa-miR-221*

RBP

AGO1, HNRNPH

RBP

AGO1, AGO2, ELAVL1, FMR1_iso1, HNRNPC,

TIA1, TIAL1

Singleton

PUM1

RBP

AGO1, AGO2, ELAVL1, FMR1_iso1, FMR1_iso7,

HNRNPU, TIA1, TIAL1

RBP

AGO1, AGO2, ELAVL1, FMR1_iso1, FMR1_iso7,

HNRNPF, TIA1, TIAL1

RBP

AGO1, AGO2, ELAVL1, EWSR1, FMR1_iso1,

FMR1_iso7, FXR1, FXR2, LIN28A, LIN28B, TIA1,

TIAL1, ZC3H7B

RBP

AGO1, AGO2, ELAVL1, FMR1_iso1, IGF2BP1,

IGF2BP2, IGF2BP3, PUM2, TIA1, TIAL1

Singleton

PABPC1

Singleton

U2AF2

RBP-miRNA

AGO1, AGO2, ELAVL1, FMR1_iso1, IGF2BP1,

IGF2BP2, IGF2BP3, TIA1, TIAL1, hsa-miR-130a,

hsa-miR-130b, hsa-miR-148a, hsa-miR-148b,

hsa-miR-301a, hsa-miR-301b

RBP-miRNA

AGO1, AGO2, ELAVL1, FMR1_iso1, IGF2BP1,

IGF2BP2, IGF2BP3, TIA1, TIAL1, hsa-miR-15a,

hsa-miR-15b, hsa-miR-16, hsa-miR-424

Singleton

DGCR8

RBP-miRNA

AGO1, AGO2, ELAVL1, FMR1_iso1, IGF2BP1,

IGF2BP2, IGF2BP3, TIA1, TIAL1, hsa-miR-106b,

hsa-miR-17, hsa-miR-20a, hsa-miR-320,

hsa-miR-93

RBP-miRNA

AGO1, AGO2, ELAVL1, IGF2BP1, IGF2BP2,

IGF2BP3, TIAL1, hsa-let-7a, hsa-let-7b,

hsa-let-7c, hsa-let-7d, hsa-let-7e, hsa-let-7f,

hsa-let-7g, hsa-let-7i

RBP

AGO1, AGO2, ELAVL1, FMR1_iso1,

HNRNPA2B1, TIA1, TIAL1