Transcriptome profiling of pyrethroid resistant and susceptible mosquitoes in the malaria vector, Anopheles sinensis

Table 1 Summary of reads and assembly from 454 GS FLX sequencing for Anopheles sinensis

Library	Raw reads	Average length (bp)	Reads used in assembly*	% reads mapped to contig set	No. contigs	N50 contigs (bp)	Average contig length (bp)	% GC contigs
Immature stage, colony	164,503	341.1	122,661	75.45	17,398	491	447	45.3
Female adults, colony	153,568	299.0	106,268	71.1	7,415	515	453	44.5
Deltamethrin resistant, field	171,679	363.3	124,723	73.0	13,897	524	481	45.5
Deltamethrin susceptible, field	134,809	304.6	91,193	68.3	10,597	464	427	45.2
Total	624,559	290.8	394,254	71.9	33,411	547	493	45.1

*Reads used in assembly is less than the total number of raw reads due to removal of duplicated, ambiguous and short (<50 bp) sequences.

ISSN: 1471-2164